| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0524 |
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| Symbol | |
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| ID | 8709068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 563478 |
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| End bp | 564257 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482638 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373765 |
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| Protein GI | 283783011 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000443046 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACTT CTACTCGTTC ATGCGCTTCT GTGATTCGTG GCATGTGGTT TCAGCTTAAA
AGCTTAGCGA AAACAACGTT TTTCTTGCAA AATGCGATAC TTGCTCCAGT ATGTTTTGCG
TTGATGAAAA TTGTTGCATA CTATGGTTTT TCTCATAATT GTGCCAACTT CCTTAATAAT
ATTTGGGTTG ATTCTTCTAT AGCTGGATTA TGGTCTGCTA CAACTACTGC TGTTGGAATT
ATTGGATACC AGCGTTATTT AGGAACATTA CAATATTTAA CTTTAAGTGT TATCTCACCT
TCTGAAGTGT TTCTTCCTAT TGTAGGATCC GCAGCTTTAC TTGGGTGCAT TGGTATGCCG
CTTGCGATTA TTACCGTTGC TGTTTTCTGC CATGGTTTCT TTATGATAAC ATTCACGCAG
TTAGTTGGAT ACTTACTTTC TATGCTTGCT TGCGTAGCTT CTGCTGCATT ATTATCTGGA
ATTTTTGTAT TATGCCGTAA AGCTACAGTT TATGAAGGTT TGATTTTAAT TCCTGTATGG
ATGCTTTGTG GAATAGTGAT ACCTGTAGAA TCAATGCCAT TGCCTGCTCG CATTATTGCG
TTTATTCATC CGCTCACGTC TGCAGTGTGG GTGGTTCATG CGCAATCGTT TAATACTACT
ACTGTGTTAG CAATTGTGTT ATGCGTTGTA TTATCCAGCG TTCTGCTTGT TATTGCAGGT
TTTATGTTAC GTCATGCTAT TCGACTTGCA ACGCTTAATG GAAGTTTGAA CATAATATGA
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| Protein sequence | MNTSTRSCAS VIRGMWFQLK SLAKTTFFLQ NAILAPVCFA LMKIVAYYGF SHNCANFLNN
IWVDSSIAGL WSATTTAVGI IGYQRYLGTL QYLTLSVISP SEVFLPIVGS AALLGCIGMP
LAIITVAVFC HGFFMITFTQ LVGYLLSMLA CVASAALLSG IFVLCRKATV YEGLILIPVW
MLCGIVIPVE SMPLPARIIA FIHPLTSAVW VVHAQSFNTT TVLAIVLCVV LSSVLLVIAG
FMLRHAIRLA TLNGSLNII
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