Gene Sked_21540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21540 
Symbol 
ID8633789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2402217 
End bp2402966 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003314908 
Protein GI269795453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.937683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TGCGGATGCT CGTGTTCCAC CTGCGCCTGT TCGGGAAGAA CACCTATTTC 
TCCCAGCTGA TGGTGACATC TACCCTGTCG ATCCTCGCCC TCCAGCTGCT CGCGGCTCAC
GGGAACGGTG CACCGGACGG CGAACCGCTC TGGTTGCGTG CCGGCATGGT CGGCACCTGG
TCGGTGTGCA CGGTCGCCGC CGGCATGATC GGCTTCCAAC GGTTCCAGGG GACGCTGGTG
CACCTGCTGA TGACCCCGTC CTCGCCGTCA CGCACGCTGC TCCCGCTGGT CGCGTCTGCC
GCGACCTTCG GCCTTCTCGC CTTCCCGCTC GCCGGGCTGG GCTCGGCCGT CTTCGGTCGT
GTCCCGTCGG CAGGCTCGTG GACGGTCCTC GCCCTGGGTG TTCTCCTCTT CTGGCTCTCC
TGCCTGTCGA TCTCGTCGCT GGTGTCGGCA GTCTTCGTCC TCACCCCGAA CGCGATCACC
TACGAAGGGC TCCTCACCGT GCCCCTGGTG CTCCTGAGCG GCGTGTTCGG GATCCCGGCG
GCCGTTCCCT CGGCCGTCGT GACCCTCACC TACGCGCTGC CGACCACGCC TGCGGTGCGG
ATCGTCCTGG ACCAGCCCAC CGGCACCGAG CTCGCCACGC TCGTCCTCGC CTGCGTCGGC
CTGTGCCTCC TCTGGGGTGC CGCCGCCCGG TGGGCGCTCT CTCGCGCGGC ACGTCGGGCT
CGCGTCACGG GCACCTTGGA GGTGGTCTGA
 
Protein sequence
MPWLRMLVFH LRLFGKNTYF SQLMVTSTLS ILALQLLAAH GNGAPDGEPL WLRAGMVGTW 
SVCTVAAGMI GFQRFQGTLV HLLMTPSSPS RTLLPLVASA ATFGLLAFPL AGLGSAVFGR
VPSAGSWTVL ALGVLLFWLS CLSISSLVSA VFVLTPNAIT YEGLLTVPLV LLSGVFGIPA
AVPSAVVTLT YALPTTPAVR IVLDQPTGTE LATLVLACVG LCLLWGAAAR WALSRAARRA
RVTGTLEVV