Gene Cphy_1006 details

Gene Information

• Locus tag: Cphy_1006
• ID: 5743946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1271631
• End bp: 1272413
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641292113
• Product: ABC-2 type transporter
• Protein accession: YP_001558125
• Protein GI: 160879157

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0898829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTA TAAAAGTAAT ATATAGTACG CTTAGACTCC AGATGAAAAA TTCATTTGCA 
AGGCCTATGT ATCGGTTTTG TCTAATTGCA AATCCGATTG TTAACACGAT ATTACTGTAT 
CATATGTTCT TAAATTCCAA CATGGATAAT TTTACAACCT ATGTTATGCT TGGAGCAGGA 
TTAATGGGGC TTTGGAGCTG TATCTGTTTC TCATCAGCTG GTGATATCAA CAGAGAGCGG 
TTCAGTGGAA CATTGTCGCT TATTTATATT ACTCCAACAA GTTTTAGTGT GATATTACTT 
GGTAAGGTAA TCGGTAATAC AATTTTATCC TTTGTATCTT TGGTAATATC ATTTTTAACT 
GCATTACTAT TTTATCAGGC ACCGATACAT ATTGAAGAGA TGGGATATTT AATGTTAGCG 
ATTTTTGCAG CTATGATTTG CTTTATTACT ATTTCAATAT TAATTGCTTA TCTTTTGACA 
TTATCAAGAA AGACACAGCT CTATATGAAT TGTATTGAGG TTCCAATCAT CTTTATCTGC 
GGCTTTTTAT TTCCGGTTGA AATACTTCCA AGTTGGGTAC AGCCAATAAG TTATATATTA 
GCACCAACAT GGGCGGTTAA GCTAATTCGC TTAAGTGTTG CTGGGTTTAC AGATTCTTTG 
ATTTATTTTA AGACACTTGG TATCCTTTGT CTTATCACCA TATTATACGT GATTGGAATC 
CTCTTAATAT ATAAACTAAT TGATCGAGAG GTTCGCATTC GAGCGTCGTT AGAGCTTAGT 
TAG 

 

Protein sequence

MNFIKVIYST LRLQMKNSFA RPMYRFCLIA NPIVNTILLY HMFLNSNMDN FTTYVMLGAG 
LMGLWSCICF SSAGDINRER FSGTLSLIYI TPTSFSVILL GKVIGNTILS FVSLVISFLT 
ALLFYQAPIH IEEMGYLMLA IFAAMICFIT ISILIAYLLT LSRKTQLYMN CIEVPIIFIC 
GFLFPVEILP SWVQPISYIL APTWAVKLIR LSVAGFTDSL IYFKTLGILC LITILYVIGI 
LLIYKLIDRE VRIRASLELS