11 homologs were found in PanDaTox collection
for query gene Gmet_0170 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU3137  cytochrome c family protein  64.03 
 
 		 591 aa  781    Geobacter sulfurreducens PCA  Bacteria  normal  0.216201  n/a   
 
 
-
 
NC_007517  Gmet_0170  cytochrome c family protein  100 
 
 		 596 aa  1253    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_2216  cytochrome c family protein  38.02 
 
 		 623 aa  365  1e-99  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000696852 
 
 
-
 
NC_011146  Gbem_2006  cytochrome c family protein  37.33 
 
 		 623 aa  357  1.9999999999999998e-97  Geobacter bemidjiensis Bem  Bacteria  normal  0.695915  n/a   
 
 
-
 
NC_010814  Glov_2825  cytochrome c family protein  35 
 
 		 625 aa  332  2e-89  Geobacter lovleyi SZ  Bacteria  normal  0.0166029  n/a   
 
 
-
 
NC_002939  GSU2934  cytochrome c family protein  28.12 
 
 		 417 aa  63.9  0.000000007  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2935  cytochrome c family protein  23.11 
 
 		 657 aa  51.6  0.00004  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0537  cytochrome c family protein  29.94 
 
 		 414 aa  51.6  0.00005  Geobacter metallireducens GS-15  Bacteria  normal  0.896583  normal  1 
 
 
-
 
NC_012918  GM21_4117  hypothetical protein  28.07 
 
 		 418 aa  49.7  0.0002  Geobacter sp. M21  Bacteria  n/a    normal  0.596924 
 
 
-
 
NC_011146  Gbem_4026  hypothetical protein  27.27 
 
 		 418 aa  46.2  0.002  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1042  Nitrite reductase (cytochrome; ammonia-forming)  31.13 
 
 		 482 aa  44.3  0.007  Geobacter lovleyi SZ  Bacteria  normal  0.0722076  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>