| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3137 |
|---|
| Symbol | |
|---|
| ID | 2688437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3442747 |
|---|
| End bp | 3444522 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637127830 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | NP_954178 |
|---|
| Protein GI | 39998227 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.216201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAC TGTTGGCGGG GAATATCGCG CTGGCTGCCC TCGCGGTCGC GGCAACCGGT
GGAACGGCGA CTGCTGCCAC GCCTCCCGCC GCCGGATCGG GATGCGTCGG CTGCCACGGC
AACCCCTCGA TCATGAAAAA GCTGGGCTAT CCCCACTTCA CCGTCACCCC TCAAGAGGTC
AGGGCCCAGA CCGGCATGCC GGCCGACTGC CACCTCTGCC ACGGCGGGAG CCCCGATGCC
AAAGAGAAAG ACAAGGCCCA TGCCGGCATG GGACGGCTCG TGGCAGTGCG GAAAAAGGGG
CTCACCGGAG AGACGGTCGA GCGAAAGCAC CCCCTTTCCC TGGGCAGCAA CCCCATGGAG
CGGATCAAGC TCATGACCGA CAAGGCCGGA ACCGCCGCGC CGGACCAGAG CGTAAGCATC
ATCCTGTGGC AGGACAAGCG CACCGACACC CTGTCTCAGG ACTTCGGGCG CATGGAGAAG
AGTTGCGGAG CCTGCCACGC GCGGCAGTTT GCCGAGTTCA CCAGGAGCAC CATGGCCCGT
AACGGCAAAC AAAGCGCCTA CCGCACCTGG ACGGACCGGG AGCGGGGCCC CCACAACTGC
GGGGCTTGGT TCGGCGACAA CCATGAAGCC ATCGCCGCAA ATACGGCGGC CCCCTTCGAT
CGGGCCACCA ACGCACTCAA CCAGCGCCAG TGCAATACCT GCCACGTGGG ATGTCTCGAC
TGCCACTACG ACCCTCAACC AGCGGACCCC GCCGACCCGA AAAAGGGAAT GCACGGCTTC
CGCAGAACTC CCCCGCCCGA AAGCTGCTAC GGCGGAGGCA GGGGGCAGAC CTGCCACGCG
GGGCCCGAGG AACGGCGGCG CGGGGCGGGA TATTTCGGCG GCGTCTATGC CAACCCGGAG
GGGGCGCCCC CTGATGTTCA TCTGCAGGCA AAGGTCGCCT GCCTCGACTG CCACGAGTCG
AGCCGCAACG GCAACGGGCT GACCCACGCC ATGGTGAAGC GCCAGGCGGC CTGCGACCGG
TGCCACGGGG CAATCGTGGC CAGTCACGGG ACATCCGTTC ATCGTACCCT TACCTGCGAG
GCCTGCCACG TGCGGAATGT GGGCGGCTAC CAGGGGACCT ACTGGGGGCC GGGAATCCTG
GGGGGAATCG GCACGCCGTT CTTCAAGTAC AAGGAATACT ATGGGATCAT GGACGATCCG
ATCCTGATCC GCAACCAGAA AGGGCGGTGG ATTCCGGTAA AGCCTTACCC CATGGCCGTG
ATGAACGTGA AGGACGCCGG ACTCAAACCC GGCCTCCACT GGCGCTGGCC CGCCACGCTG
CCCGATCTGG AGCGGACCGA CGATGCCTAC GGCTACGTGG GCCTCGTGGG TGGCCTGCCG
GAAAACAACA AGGCGCTCCT CTGGATCCAG ATGGACAAGG TCTCTCACAA GTACGGCCCG
CCCCGGCCGT GCGACTCGTG CCACGGTGCT GCCGACGGCG CCCAGCGCCG GGAGGTGGAC
TGGGATTTTA CCGATGCCGG AGCCCTTCCT TTCAGCGGCA GCCATACGGT GGTGGCCGAT
GCCAGGGGGC TCGCCATCCA CAACATATCG ACACAGGAGC GGATCGAGAC GACCGCGGGC
ACGACCGTCT CCAGCTTTGC ACCCTGGTTC TACCTGAAGA ACGCGTGGAC CATTCCGGGC
GATTTCTCCC TGCCGACCAT CGGGGATCGT ACCCGGTACG AGCGGTTCAA GGACAACCGC
GACGTCGCCC GTAACGCCGG TATAATTCAC CGCTGA
|
|---|
| Protein sequence | MLRLLAGNIA LAALAVAATG GTATAATPPA AGSGCVGCHG NPSIMKKLGY PHFTVTPQEV
RAQTGMPADC HLCHGGSPDA KEKDKAHAGM GRLVAVRKKG LTGETVERKH PLSLGSNPME
RIKLMTDKAG TAAPDQSVSI ILWQDKRTDT LSQDFGRMEK SCGACHARQF AEFTRSTMAR
NGKQSAYRTW TDRERGPHNC GAWFGDNHEA IAANTAAPFD RATNALNQRQ CNTCHVGCLD
CHYDPQPADP ADPKKGMHGF RRTPPPESCY GGGRGQTCHA GPEERRRGAG YFGGVYANPE
GAPPDVHLQA KVACLDCHES SRNGNGLTHA MVKRQAACDR CHGAIVASHG TSVHRTLTCE
ACHVRNVGGY QGTYWGPGIL GGIGTPFFKY KEYYGIMDDP ILIRNQKGRW IPVKPYPMAV
MNVKDAGLKP GLHWRWPATL PDLERTDDAY GYVGLVGGLP ENNKALLWIQ MDKVSHKYGP
PRPCDSCHGA ADGAQRREVD WDFTDAGALP FSGSHTVVAD ARGLAIHNIS TQERIETTAG
TTVSSFAPWF YLKNAWTIPG DFSLPTIGDR TRYERFKDNR DVARNAGIIH R
|
|---|
| |