Gene Gbem_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2006 
Symbol 
ID6782000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2310614 
End bp2312485 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content60% 
IMG OID642768001 
Productcytochrome c family protein 
Protein accessionYP_002138815 
Protein GI197118388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.695915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGC TGCTCACGAT GTTGATGCTG CTGCTGGCCA CTCAGGCTTG GGCCTTCGAT 
GCTAAATCGC AGTGCGTAAT CTGCCATGGA GACAAGGGCA AGATGGAGTC TCTTGGCGCC
GCGTCGATGT ACCTGGACCC GGCCCAGGTC GATCGTGAAG TGGGGATGGA CGGCGCCACT
TGTGCGGATT GCCACCTGGG GGATTCTGCG CAGCCCTCGA AGGAAGCATC GCACAAGGAC
ATGTTGCGTC CTTTCGTGGT CGGGGTGGGG CCAAAAGTCA AGGGGCAGGC GGTTTCCCGC
GCCGATGCAG GGGTTTTGAA GCCCATAGCT CCTCTCGGAG ACGGCATGGA TCGGATGCTG
CCGGAAGGCG ATCCCAAAAA GCTGGAGGGG CTCGGGGTAA AGATGCTGAC GGGAATCGAG
TGGCACGACC GCGACCCTGA AACCCTCGCC TATTCTCCCA AGGTTGCGGA GCAGACCTGC
GGCAGGTGTC ATGCAAAAGA GGTGAAGGAT TACAACAGTT CCGCCAAGGG GCTGTTGAAA
CACCAGCGCG CCTTCCGGAA ATGGGCCGAG CCCCTTCCCG GGCCGCAGAA CTGCGGCATG
TGGTTCGGGC AGAACTACGA GAATATGAAG AGCCAGACTT CGGTACCTTT CACAGCCGCA
CAGAATGCAG CCACAGATCG CAGCTGCAAC ACCTGCCATC CCGGTTGCAA CGACTGTCAC
TACAAGCCCT TCACTGGCAA GGGGCGGCAT TCCTATGGCA AACCCGACAC CGACAGCTGC
TACGGCGGGG GGAGAGCGAG CATCTGTCAT GCAGGACCTA TGGACCGTCG GCGCGGCGCC
GGATACGTCC GCGGCGAGTA CGCCTTTCCG AGCAACCTGC CGCGAGGGGC CCACATAAAG
GCCGGCGTAC AATGCCTGGA TTGCCACAAG CCGGTGAACC ATCAATTCGG CCACTTAGCC
TCTGACGACG CAAGAGGGGC CTGCGCCAAG TGCCATGCCG ACATCGTCAA GGCCGTGCAG
ACTTCGTCGC ATAGCAAGGT CGATTGCGCC GCCTGCCACA TAACCGTCTC CGGCGCCTAC
CAGTACACCT TCTGGGGTAA GGGAAACTTT GCCGGCGTGG AAACGCCCTA CGGAAAACAT
AAGGAGTACT ACGGCACGCG CGACCTCCCG ACCCTGATCA AGAACGCATC TGGCCGCTGG
ATTCCCGTCA AGCCGTATCC TATGGCGGTG CTGAACCAGA CGATGGAACT GGGGCCCACC
GGGCTTTTGT TCCGCTCCAT CCCAAAAAGA AGCGTTCCCG GCAACGTCAG GATAGGTGAG
CCTCCCGTAT TCGAAGTCTC CCGCGCCGCC ACCGATGTCA ATGACGCCTT TATCATCGTC
GGCACCCGCA ACGATCTCCC CTCCGGCAAC AAGGCGATCC TCTGGGTGCA GATGGACAAG
CTAAGCCACG CCCTGGGCCA GCCGAGAGGA TGCGCCACCT GTCACGACTC CCACGTGCAG
GTCGGAAAGT CCGAGTGGAG CTATTTCGAA TCAAAGGACG TAGCCAAACG GTTTAAAGGG
AGCTACACGG TAACCGCCGA CAAGAACGGC ATCAGGTTCA GCGACACCGT ATGGGAGACC
CCGATCATGG CAGCCAATCG CAAAGTGGAG GACATAGCGC CATTTGCCGT GCTGCCCAAA
GACGCCTGGG ATGTGAAAGG TATAGACCTC TCCATCCCCT TCGACGAGAA GAAGACAGGG
AAGGAGAGGG GAGAGCTTGA CAAGTTCCTG GCCGAGCTTG GCAAGCGGAA GGGTGGCGAT
GAGCTGCGAA AGATCAGGGT GATCGCCTAC CACAACCTGG AAATGGCGCA GAAGATGCTG
AAAGCTTTGT AG
 
Protein sequence
MNTLLTMLML LLATQAWAFD AKSQCVICHG DKGKMESLGA ASMYLDPAQV DREVGMDGAT 
CADCHLGDSA QPSKEASHKD MLRPFVVGVG PKVKGQAVSR ADAGVLKPIA PLGDGMDRML
PEGDPKKLEG LGVKMLTGIE WHDRDPETLA YSPKVAEQTC GRCHAKEVKD YNSSAKGLLK
HQRAFRKWAE PLPGPQNCGM WFGQNYENMK SQTSVPFTAA QNAATDRSCN TCHPGCNDCH
YKPFTGKGRH SYGKPDTDSC YGGGRASICH AGPMDRRRGA GYVRGEYAFP SNLPRGAHIK
AGVQCLDCHK PVNHQFGHLA SDDARGACAK CHADIVKAVQ TSSHSKVDCA ACHITVSGAY
QYTFWGKGNF AGVETPYGKH KEYYGTRDLP TLIKNASGRW IPVKPYPMAV LNQTMELGPT
GLLFRSIPKR SVPGNVRIGE PPVFEVSRAA TDVNDAFIIV GTRNDLPSGN KAILWVQMDK
LSHALGQPRG CATCHDSHVQ VGKSEWSYFE SKDVAKRFKG SYTVTADKNG IRFSDTVWET
PIMAANRKVE DIAPFAVLPK DAWDVKGIDL SIPFDEKKTG KERGELDKFL AELGKRKGGD
ELRKIRVIAY HNLEMAQKML KAL