9 homologs were found in PanDaTox collection
for query gene Gbem_1538 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1538  hypothetical protein  100 
 
 
137 aa  278  1e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1806  hypothetical protein  36.36 
 
 
126 aa  85.9  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2036  hypothetical protein  34.62 
 
 
129 aa  75.5  0.0000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0989  hypothetical protein  28.91 
 
 
131 aa  68.2  0.00000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.670007  n/a   
 
 
-
 
NC_011146  Gbem_2343  hypothetical protein  36.36 
 
 
113 aa  67.8  0.00000000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.29323  n/a   
 
 
-
 
NC_010814  Glov_2153  hypothetical protein  31.25 
 
 
135 aa  67.4  0.00000000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2677  hypothetical protein  31.45 
 
 
135 aa  62  0.000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000254633 
 
 
-
 
NC_007498  Pcar_0393  MshA pilin protein MshD  31.48 
 
 
149 aa  43.5  0.001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000144635  n/a   
 
 
-
 
NC_009656  PSPA7_5191  type IV pilus modification protein PilV  33.33 
 
 
185 aa  43.1  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.186729  n/a   
 
 
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