| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2677 |
|---|
| Symbol | |
|---|
| ID | 8138019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3112546 |
|---|
| End bp | 3112953 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644870281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003022471 |
|---|
| Protein GI | 253701282 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4967] Tfp pilus assembly protein PilV |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0000254633 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAA TTGCCAGCAA GACAATATCG ACACTAAATA AAAACGACGG GTTTACCCTG
ATCGAGGTTG TGGTTTCCAT GGTCATCGTG CTGGTCGGCC TGCTGGGGCT GGTACAGGCG
ATGGGGGTGG CTACCTCCTA CAACCTCAAA AACCAGTTCA GGGACGAGGC TGTACTGATC
GGAGAGGAAC AGATGGCTGA TCTTTTCCGT CTTCCGGAAG CAGCTCAAAT CCCCTTCGAC
AGCATGTCCG CCGCCAGCCG GATACGGGGG GATAGGAATA TGTACGGCAT CATCCGGAGT
GCGAAGAAGG TGGGGAGTAC CTCCAGTTAT CGATTGACGG TCAACGTCAA CTGGACTCAC
AAGCAGGTTC CTTACCAGTA CGAAGTTCAG ACGATGCGGA CCTATTAA
|
|---|
| Protein sequence | MEPIASKTIS TLNKNDGFTL IEVVVSMVIV LVGLLGLVQA MGVATSYNLK NQFRDEAVLI
GEEQMADLFR LPEAAQIPFD SMSAASRIRG DRNMYGIIRS AKKVGSTSSY RLTVNVNWTH
KQVPYQYEVQ TMRTY
|
|---|
| |