| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0989 |
|---|
| Symbol | |
|---|
| ID | 4573211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1034516 |
|---|
| End bp | 1034911 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639755029 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900674 |
|---|
| Protein GI | 118579424 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4967] Tfp pilus assembly protein PilV |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.670007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC ATGTGAGTTC CAATAGCAAG GGCTTTACCC TGATCGAGTT TCTGGTCGCC
ATCGTAATTC TGATGGTGGG GCTGCTCGGC CTGTTGCAGA CGGTCAATTA TGCGATCGTG
CACAACATGG GAAACCAGTT GCGCCAAGAG GCGCTCATGC TGGCCGATGA AAGAATGAAC
ACGGAGAAGG CCAGGTCCTA CGACATGATC GATGTGGTCC AGCGCAGTTT TTCCACCAGC
CGGATGGTAA ACGGGGCCTT CCGCAGTTAT TCGGTCTCCC AGAGCGTTAC GGAGCCGACA
AGCCGGACCA AGCAGATTGA ATTGCAGATT ATCTGGCACT ACAAGGGAGA GCGCTACACT
CATTCCGTAC TGTCCCTCAT TTCCGAATTT GAGTAA
|
|---|
| Protein sequence | MAIHVSSNSK GFTLIEFLVA IVILMVGLLG LLQTVNYAIV HNMGNQLRQE ALMLADERMN
TEKARSYDMI DVVQRSFSTS RMVNGAFRSY SVSQSVTEPT SRTKQIELQI IWHYKGERYT
HSVLSLISEF E
|
|---|
| |