7 homologs were found in PanDaTox collection
for query gene Franean1_3449 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3449  hypothetical protein  100 
 
 
151 aa  298  1e-80  Frankia sp. EAN1pec  Bacteria  normal  0.178666  normal 
 
 
-
 
NC_009921  Franean1_3330  TetR family transcriptional regulator  56.67 
 
 
221 aa  75.1  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.537262 
 
 
-
 
NC_008726  Mvan_3393  TetR family transcriptional regulator  44.12 
 
 
193 aa  58.9  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.708243  normal  0.761314 
 
 
-
 
NC_008146  Mmcs_0336  TetR family transcriptional regulator  31.82 
 
 
204 aa  45.1  0.0003  Mycobacterium sp. MCS  Bacteria  normal  0.153342  n/a   
 
 
-
 
NC_008705  Mkms_0346  TetR family transcriptional regulator  31.82 
 
 
202 aa  45.1  0.0004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.617335 
 
 
-
 
NC_009077  Mjls_0325  TetR family transcriptional regulator  31.82 
 
 
202 aa  44.7  0.0005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.690003 
 
 
-
 
NC_009338  Mflv_1903  TetR family transcriptional regulator  31.82 
 
 
208 aa  43.5  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.712719  normal  0.266183 
 
 
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