Gene Mvan_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3393 
Symbol 
ID4645003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3609333 
End bp3609914 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID639806871 
ProductTetR family transcriptional regulator 
Protein accessionYP_954196 
Protein GI120404367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.708243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.761314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAG AGGATCCGAT CCTGACCGTG GTCGTCGACC TCTTGGAGAA CGAGGGCTAC 
GACGCGGTAC AGCTGCGCGA GGTCGCCCGC CGTTCCCGCA CCTCGCTGAC CACCATCTAC
AAGCGGTACT CGAATCGCGA CGAGCTGATT CTCGCCGCAC TCGAGGCCTG GACCGACACC
CACCGGTACG CCGCGGTGGC CGAGCAGCGG CGCGAGCCCG GCGAGACGCT GCACGACGCG
TTGATGAGGC TGTTCCGCGT GCTCTTCGAG CCGTGGGAGC GTCATCCCGC GATGCTGGCC
GCCTACTTCC GCGCGCGCAC CGGCCCGAGC GGAAAGCGGC TGCTGCGAAG GGGTCTCGAC
GTCGTGGTGC CCGCGGCCCT CGACGTGCTC GCGGGTGTGG ACGAAGAGTT CATCGCCGAC
ATGGACACCG TCATCGCCAA CGTCATCTAC GGCCTGCTCG GACGGTTCGC CGCGGGCGAG
ATCACGATCA CCGACATCCT GCCCGCGATC GACCGCACCG TGTATCGGCT GACCGCCGGT
TATGCCCTGG AAGCTGCAGG GGATGGCGTC CGCCGCGGCT GA
 
Protein sequence
MGAEDPILTV VVDLLENEGY DAVQLREVAR RSRTSLTTIY KRYSNRDELI LAALEAWTDT 
HRYAAVAEQR REPGETLHDA LMRLFRVLFE PWERHPAMLA AYFRARTGPS GKRLLRRGLD
VVVPAALDVL AGVDEEFIAD MDTVIANVIY GLLGRFAAGE ITITDILPAI DRTVYRLTAG
YALEAAGDGV RRG