16 homologs were found in PanDaTox collection
for query gene Franean1_3036 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3036  putative integrase/recombinase  100 
 
 
128 aa  252  1.0000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4492  integrase family protein  53.6 
 
 
422 aa  122  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3611  integrase domain protein SAM domain protein  41.98 
 
 
399 aa  86.7  9e-17  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00442535  normal  0.0137307 
 
 
-
 
NC_007777  Francci3_2147  phage integrase  44.23 
 
 
411 aa  77.4  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3532  phage integrase  44.23 
 
 
411 aa  77.4  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  0.346968  normal  0.212487 
 
 
-
 
NC_008697  Noca_4792  phage integrase family protein  39.6 
 
 
411 aa  68.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2265  phage integrase family protein  39.6 
 
 
411 aa  68.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2972  phage integrase family protein  39.6 
 
 
411 aa  68.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5285  phage integrase family protein  44.21 
 
 
388 aa  65.9  0.0000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008537  Arth_4520  phage integrase family protein  47.22 
 
 
400 aa  50.8  0.000005  Arthrobacter sp. FB24  Bacteria  normal  0.167996  n/a   
 
 
-
 
NC_008541  Arth_0993  phage integrase family protein  47.22 
 
 
400 aa  50.4  0.000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4150  integrase family protein  39.39 
 
 
373 aa  49.3  0.00002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.333103 
 
 
-
 
NC_009338  Mflv_4645  phage integrase family protein  37.66 
 
 
360 aa  47.4  0.00007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_3147  Tn554-related, transposase A  26.26 
 
 
372 aa  43.5  0.001  Bacillus cereus ATCC 10987  Bacteria  normal  0.85236  n/a   
 
 
-
 
NC_005707  BCE_A0242  Tn554-related, transposase A  27.94 
 
 
519 aa  41.6  0.004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_20700  site-specific recombinase, integrase family  31.15 
 
 
395 aa  40.4  0.007  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
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