| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3611 |
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| Symbol | |
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| ID | 8449230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3966849 |
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| End bp | 3968048 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042681 |
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| Product | integrase domain protein SAM domain protein |
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| Protein accession | YP_003202917 |
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| Protein GI | 258653761 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00442535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0137307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTCGT TGCCCGCGCC GCGCGATGTC GCGATGCTTC GTGTTCCAAC GATCGGCCGG
GTCCACCGGA CTGGTCGGGG TCCGTGGGAG GTGCTGGGCG CAGACGGCGA GCCGGTGCTG
GCGTGGGTGA GTTTCCGGGG CGAGCTTGTC GCCGGCGGGT GTTCCGCCGC GACGTGCCGT
TCCTACGCCC ACGACATTCT GCGGTGGCTG CGTTTCCTTG CCGCGGTGGG CGTTTCGTGG
CAGCAGGCCG GCAGGGTCGA GGTGCGCGAC TACGTGCGGT GGCTGCGCAC GGCGGCCAAC
CCAGCCCGCG ACCGGCGCAC AGCGGCGGGT GGCCGGCCAC CGGCCGGGAC GGTGAACACC
GCGACGGGCA AGGCCTACCT AGCGGCGGGG TATGCGCCCA GGACCATCAA CCATGCGTTG
TCGGTGCTCA GCGAGTTCTA TCGGCACGCC GTCGACGCCG ATCTCGGCCC GTTGCGGAGC
CCGGTGCCGC TGCGGCGGAG CGTGACCCGG TTCCCCGGCC AGTCCACGGC ACGAGCGGCT
GTCGGCGGCC CGGCCTATCG GCAGCGGGAA CCGGTCGCTC AACCCCGCGC GCTGTCCGAG
CCGTTGCTGC AGCGTGTGTT CGCGGCTCTG CGGCATGACC GGGACCGTGC CCTGATCGCG
GTGGCGTTGA GTTCGGGGGC GCGGGCGAGC GAGTTGTTGT CGATGGTCCG CAACGGGATC
GACGTCGGCT TGGGTGTGGT GTCGGTGGTT CCGAAGGGTC GACCGGGTCG GGTGTGGATA
CCGCTGGCGC CGGAGGCGCT GGTGTTGATT GGCCGTTACC TCGCGGCGCA ACCACTGGGG
TTACCCGACG ACCCGGTGTG GATGACGATC CGTCGGCCGG CTCATCCGTT GACGTATTTC
GCGATGCGTC AGGTCCTGGA GCGGGTCAAC CAGGAGCTCG GCACGAACAT CACCTGGCAC
GACTTCCGTC ACACGTTCGC GCATCGGCTG TTGGCCGACG ACCGGTTGTC ACTGACGGAT
GTGCAGACGC TGATGCGGCA CCGCAGCCTG ACGACGTTGA CGGACTACTC CGCGGCCAGG
TTGGACGAGT TGGTGACCCG CTTGCACGAG CACCTGGCCC GGCCGGCGCC GGCGCCCACC
GTGGCCGTGG GCTACGACCA GGACGACATG CAGGTCCTGT TCCCGGGTTT GACACCGTGA
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| Protein sequence | MDSLPAPRDV AMLRVPTIGR VHRTGRGPWE VLGADGEPVL AWVSFRGELV AGGCSAATCR
SYAHDILRWL RFLAAVGVSW QQAGRVEVRD YVRWLRTAAN PARDRRTAAG GRPPAGTVNT
ATGKAYLAAG YAPRTINHAL SVLSEFYRHA VDADLGPLRS PVPLRRSVTR FPGQSTARAA
VGGPAYRQRE PVAQPRALSE PLLQRVFAAL RHDRDRALIA VALSSGARAS ELLSMVRNGI
DVGLGVVSVV PKGRPGRVWI PLAPEALVLI GRYLAAQPLG LPDDPVWMTI RRPAHPLTYF
AMRQVLERVN QELGTNITWH DFRHTFAHRL LADDRLSLTD VQTLMRHRSL TTLTDYSAAR
LDELVTRLHE HLARPAPAPT VAVGYDQDDM QVLFPGLTP
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