| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4492 |
|---|
| Symbol | |
|---|
| ID | 8450119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4998673 |
|---|
| End bp | 4999941 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645043534 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003203762 |
|---|
| Protein GI | 258654606 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCGG GCATGGCCGA TGCCCTTGGT GGAGAACGTG ATCTCGCGTC GCTGGTGGTG
CCGGCAGCGG GGTCCGTCGT CGCGGTCGAT GACGTGTGGG AGCCGGTCCG GCTGCTCGAT
GCCGGCGGTG CTGTGGTCGG GGCGGTCCGC GCATTCCTGC AGGACCTGCA GGCGTCGGGG
CGGTCGGCGG CCACGCAGCG GTCGTATGAG ATGGACCTGC TGCGCTGGTT TCGGTTCGGT
TGGGCGATCG ACGTGTCGTG GGATCAGGCC ACCCGGGTGG AGGCCCGCGA CTTCTGTCGC
TGGCTGTCGT TGCGGGAAAA GCCCTCCCAA CCGTCGAGTG CCGGTGACGG GGTGGTCCGC
GGTCAGCCCA ACGCGGTGAC CGGGCGGGCC GGGCCGGGTG ATCGGTACGC GGTGGCGACC
CGGGCCCATT CGGAGACGGT GCTGCGCGGG TTCTACGAGT TCCACCGGGA GGCTGGGACC
GGGCCGATCG TGAACCCGTT CCCGCTGGTG CGGGAGCGCA GCAGTGGGCG GGCGAACGCG
CACCACAACC CGATGGAGCC GTTCCGAAAC GAGCGGGTGG GGTTGTATCG ACCGCGGGCG
CCGCGGCGGG TCCCGCGGTC CATCCCGGAT GAGTTGTTCA ACCGGCTGTT CGCCGAGTTG
GGCTCGCACC GGGACCGAGC CCTTGTTGCG CTGTGGGTGT CGACCGGGGC GCGGTCGGCG
GAGCTGCTCG GCGTCCGCCG CGGGGATGTC GACCCGGGCC AGCAGTTGGT CACGGTGGTC
CGCAAGGGCA GCCGCGCGGT GCAGCAGCTG CCGGCCTCGC CGGATGCGTT CGTGTGGCTG
CGGCTCTACC AGGCGACGCT GGACGACACG ACGCCCGCGG GTCGGGACGA TCCGCTGTGG
CTGACGCTGC GCCGACCTCG GCGGCCGTTG ACGTATCCGG CGGCGCGGGC CATGTTCGGC
CGGGCGGCCG GCGCGTTGGG CGCGAACTGG ACCCTGCACG ATCTGCGTCA CACGGCGGCG
TATCGGATGG CGCGAGACCC GTTGGTGCCG TTGACCGATG TGCAGTGGGT CCTCGGTCAC
GCCCATCTGT CCACCACGCA GATCTACCTC ACGGCCCGGC CGGGCGACGT GATCGCCGGC
ATGCTGGCCC ACCATCGCCG TAGCGAGCAG CAGGTTGAGC ATCCTGCTCG CCCACTGCCG
GGTGAGGCCG GCCTCGGCGG GTATGCCCAG GACACGCTGG ACGTGCTGTT CGCCGGTCGG
ACCCGATGA
|
|---|
| Protein sequence | MVPGMADALG GERDLASLVV PAAGSVVAVD DVWEPVRLLD AGGAVVGAVR AFLQDLQASG
RSAATQRSYE MDLLRWFRFG WAIDVSWDQA TRVEARDFCR WLSLREKPSQ PSSAGDGVVR
GQPNAVTGRA GPGDRYAVAT RAHSETVLRG FYEFHREAGT GPIVNPFPLV RERSSGRANA
HHNPMEPFRN ERVGLYRPRA PRRVPRSIPD ELFNRLFAEL GSHRDRALVA LWVSTGARSA
ELLGVRRGDV DPGQQLVTVV RKGSRAVQQL PASPDAFVWL RLYQATLDDT TPAGRDDPLW
LTLRRPRRPL TYPAARAMFG RAAGALGANW TLHDLRHTAA YRMARDPLVP LTDVQWVLGH
AHLSTTQIYL TARPGDVIAG MLAHHRRSEQ QVEHPARPLP GEAGLGGYAQ DTLDVLFAGR
TR
|
|---|
| |