Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3532 |
Symbol | |
ID | 3904471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4220923 |
End bp | 4222158 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880853 |
Product | phage integrase |
Protein accession | YP_482613 |
Protein GI | 86742213 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.346968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.212487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGAGG ACAGCGATCA TCGGGTGATC GAGGCGATCC GGCTTCCGCT GTGGGGAAGC GTGGTCGCGT CCGACGGCGT GGTGCCGTGG AGGCTGGTCG ACGGCCTCGG TGAGCCGGTC GAGCCGGTCG AGGTCTTCCT ACGGGACTTC GTCGCGCAGG GCCGGTCGGC GAACTCGGTG CGCAGCTATG CGCTGGCGTT GCTGCGGTGG TGGCGGTTTC TGGTCGCGGT TGGAGTGGCC TGGGACCGGG TGAGTCCGGC GGAGGTCCGG GACTTCGTGC TGTGGCTCGG GCAGGCGACC AAGCCGGTCG CGGCGGCGCG GGTCGGGTCG CGGGCGACCG TGGGGCAGGT CAACCCGGTG ACCCGTAAGC GCCACCTCGG GGACGGCTAC GGGCCGGCGA CGGTGCGGCA CAGCAACGCC GTGCTGCGGA CCTTCTATGA GTTCTGGCTG GAGCGTGGTG AGGGGCCGCT GGTGAATCCG GTTGTGCTTG CTCGGGCGGG CCGGGGCCGG GCGCACGCGC ACCACAACCC GCTGGAGGCA TTCCGTCCGG AGGGGCGGCT GCGTTATAAC CCTCGGCTGC CGAAGCGGAA GCCGAGGGCG ATGCCGGACG AGCGGTGGGA CGCGCTGTTT GCGGCGATGG GCCGTAACCG GGACCGGGCG ATCCTGGCGC TGGGCGTGTC CACCGGTGCC CGCGCGGCCG AGCTGCTCGG CATGCGCGGC GCGGACCTGG ACTGGGGTGG CCAGCTGGTG CGGGTGGTCC GCAAGGGGAC GCGGGCCGAG CAGTGGCTGC CGGCGAGCCC GGAGGCGTTC GTCTGGCTGC GTCTCTACCT GGCCGACGTC GGCGGCGGTG TGCTGGGCGC GGGTGATCCG GTCTGGCGGA CGGTCTATCG GCGCGGCGGG GTCCACGAGC CGTTGAACTA CGAGGCGCTG CGGGCGGTCT TCCGTCGGGC GAACCGCCGG TTGGGCGCGA ACTGGACGAT GCACGATTTG AGGCACACCT GTGCGATTCG GATGGTGCGC GACGGCCGGC TGTCGCTGCG CGACGCGCAG ACGATCCTCG GCCACGCCCA CCTGTCGACG ACCCAGCTCT ACCTGGAGCA GGACGACGAG GAGGTCTTCG CTCGGGTCCG GGAGCATTTG GCTGCGCGGG AAAGACCTCG CCCCGCGCCC CCAGCGCCGG CGGCCCTCGG CTACGACCCC GCTGACCTCG CGGTCCTGTT CGGGAACCCG AGGTGA
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Protein sequence | MFEDSDHRVI EAIRLPLWGS VVASDGVVPW RLVDGLGEPV EPVEVFLRDF VAQGRSANSV RSYALALLRW WRFLVAVGVA WDRVSPAEVR DFVLWLGQAT KPVAAARVGS RATVGQVNPV TRKRHLGDGY GPATVRHSNA VLRTFYEFWL ERGEGPLVNP VVLARAGRGR AHAHHNPLEA FRPEGRLRYN PRLPKRKPRA MPDERWDALF AAMGRNRDRA ILALGVSTGA RAAELLGMRG ADLDWGGQLV RVVRKGTRAE QWLPASPEAF VWLRLYLADV GGGVLGAGDP VWRTVYRRGG VHEPLNYEAL RAVFRRANRR LGANWTMHDL RHTCAIRMVR DGRLSLRDAQ TILGHAHLST TQLYLEQDDE EVFARVREHL AARERPRPAP PAPAALGYDP ADLAVLFGNP R
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