9 homologs were found in PanDaTox collection
for query gene Francci3_4393 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_4393  hypothetical protein  100 
 
 
221 aa  434  1e-121  Frankia sp. CcI3  Bacteria  normal  0.343067  normal 
 
 
-
 
NC_009921  Franean1_0180  hypothetical protein  55.24 
 
 
218 aa  169  2e-41  Frankia sp. EAN1pec  Bacteria  normal  0.323163  normal  0.508891 
 
 
-
 
NC_008578  Acel_0098  hypothetical protein  40.16 
 
 
210 aa  66.2  0.0000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0815  hypothetical protein  38.83 
 
 
189 aa  51.6  0.000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.257699 
 
 
-
 
NC_013093  Amir_0429  hypothetical protein  34.34 
 
 
220 aa  48.5  0.00007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0881572  n/a   
 
 
-
 
NC_013159  Svir_34530  hypothetical protein  34.78 
 
 
214 aa  46.6  0.0003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.278012  normal 
 
 
-
 
NC_011886  Achl_0891  hypothetical protein  31.55 
 
 
214 aa  45.8  0.0006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  33.62 
 
 
505 aa  42.4  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  31.58 
 
 
520 aa  42  0.008  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
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