Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34530 |
Symbol | |
ID | 8388777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3759317 |
End bp | 3759961 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644977475 |
Product | hypothetical protein |
Protein accession | YP_003135244 |
Protein GI | 257057412 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.278012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCT TCGACGGGAT GTCAAGGCCG TTGCGGGCCG CGGGACTGGG GTTGTTGGCG GTCGCGGTCG TCGCGGCGGC CATCGGGGGC GTCACGCTCG TGACGGGCGG TGCCGAACCG GACAACGCCG CGGCCAGCTC ATCCGCCGAG CCCGAAAGGA CCGAGCGGGG CACCGGCGGC GGTGAGCCCG ACGCGCCGGA CGGCGGAGCG CCGGACGGGT CGTCCCCGCA GTCACCACCG GACGACACCG ACGTCGACGA CGAGGCCGGC GGCGAGGACG GTGATGCCGA CCGGGCCGGG TCCGACGGCA CCGACGATGA GGTGAGGGAC CAGCCGGTGG CCGAGCTGGA GGTCCCGGTG CGGGTCTACA ACAACAGCAC CATCGGCGGA CTCGCCGCCG AGGTGAGGGA AGACCTGGCC GCGCGGGGTT GGAACGTCGT GGAGATCGGC AACTACTCCG CCGGCAACAT CCCCACCAGT ACCGTTTACT TCCGCCCCGG AACCGACGAG GAGTCCGCCG CCCGCGCGCT GGCCGAGGAC TTCGGGATGA GGGTCGAACC CCGGTTCGAC GGCATCGCGG ACGCCAGCCC CGGTGTGATC GTGATCGTCA CCAAGGACTA CGAGGAGCCG CGCGGCGGCA AGTGA
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Protein sequence | MSIFDGMSRP LRAAGLGLLA VAVVAAAIGG VTLVTGGAEP DNAAASSSAE PERTERGTGG GEPDAPDGGA PDGSSPQSPP DDTDVDDEAG GEDGDADRAG SDGTDDEVRD QPVAELEVPV RVYNNSTIGG LAAEVREDLA ARGWNVVEIG NYSAGNIPTS TVYFRPGTDE ESAARALAED FGMRVEPRFD GIADASPGVI VIVTKDYEEP RGGK
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