Gene Francci3_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4393 
Symbol 
ID3907367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5250499 
End bp5251164 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID637881724 
Producthypothetical protein 
Protein accessionYP_483468 
Protein GI86743068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.343067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATG CCACGAACGC ACCGCAGCGG CGTCCCCACC GGTGGCGCCC GGACCGGCTC 
CACACCCTCG GCGCGGGCGT CGTCGCGGTT CTCGCCGTAC TCGCGGGCAT CCTGGTGGTC
AATCTGCTGA ACGGCTCGTC CAACACGGAC GGCTCCACCA CCCAGGTCGC GGCCCCGACG
CGCTCGGCGC GGCCGGGCAC GGACCAAGCC GGCGGCGGCC GGACCACTCC GGCCCCGCCG
CCGCACCGCG CGGCGGCCCC GGCCCCCGGC CCGAGGGCCA CGAAGACGGC ATCGGCGTCC
CCGAAACCGA CGCCGGCGCC GTCCGCGTCC ACCGCGACGA AGCCGCCGGC CCCGCCGGGA
CCAAAGGCCA CAGCCCCGGT GGTCGTCCTG AACAACTCGC GGATCGCCGG ACTCGCCGAG
GTGGCCGCCA AGCAGGTCGA GTCGGCCGGG TTCCGGGTCG AGCGGGTGGG CAACTACCAG
TCGATCTACA ACGTCCCGGT GACGACGGTC TTCTACGACG ACGCCGACGC CGACGCCGCC
CGCGCCCTGA AGGAGGCGAT GCCGGGCATC GAGAGCATCG TGCCCCGGTC GAAGACCAGA
ATCGTCTCCA CCGACACACT GATCCTGGTG ATCACCCGCG ACTTCCCCGC CCATCCGGAA
AAATGA
 
Protein sequence
MTHATNAPQR RPHRWRPDRL HTLGAGVVAV LAVLAGILVV NLLNGSSNTD GSTTQVAAPT 
RSARPGTDQA GGGRTTPAPP PHRAAAPAPG PRATKTASAS PKPTPAPSAS TATKPPAPPG
PKATAPVVVL NNSRIAGLAE VAAKQVESAG FRVERVGNYQ SIYNVPVTTV FYDDADADAA
RALKEAMPGI ESIVPRSKTR IVSTDTLILV ITRDFPAHPE K