Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4393 |
Symbol | |
ID | 3907367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5250499 |
End bp | 5251164 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881724 |
Product | hypothetical protein |
Protein accession | YP_483468 |
Protein GI | 86743068 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.343067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATG CCACGAACGC ACCGCAGCGG CGTCCCCACC GGTGGCGCCC GGACCGGCTC CACACCCTCG GCGCGGGCGT CGTCGCGGTT CTCGCCGTAC TCGCGGGCAT CCTGGTGGTC AATCTGCTGA ACGGCTCGTC CAACACGGAC GGCTCCACCA CCCAGGTCGC GGCCCCGACG CGCTCGGCGC GGCCGGGCAC GGACCAAGCC GGCGGCGGCC GGACCACTCC GGCCCCGCCG CCGCACCGCG CGGCGGCCCC GGCCCCCGGC CCGAGGGCCA CGAAGACGGC ATCGGCGTCC CCGAAACCGA CGCCGGCGCC GTCCGCGTCC ACCGCGACGA AGCCGCCGGC CCCGCCGGGA CCAAAGGCCA CAGCCCCGGT GGTCGTCCTG AACAACTCGC GGATCGCCGG ACTCGCCGAG GTGGCCGCCA AGCAGGTCGA GTCGGCCGGG TTCCGGGTCG AGCGGGTGGG CAACTACCAG TCGATCTACA ACGTCCCGGT GACGACGGTC TTCTACGACG ACGCCGACGC CGACGCCGCC CGCGCCCTGA AGGAGGCGAT GCCGGGCATC GAGAGCATCG TGCCCCGGTC GAAGACCAGA ATCGTCTCCA CCGACACACT GATCCTGGTG ATCACCCGCG ACTTCCCCGC CCATCCGGAA AAATGA
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Protein sequence | MTHATNAPQR RPHRWRPDRL HTLGAGVVAV LAVLAGILVV NLLNGSSNTD GSTTQVAAPT RSARPGTDQA GGGRTTPAPP PHRAAAPAPG PRATKTASAS PKPTPAPSAS TATKPPAPPG PKATAPVVVL NNSRIAGLAE VAAKQVESAG FRVERVGNYQ SIYNVPVTTV FYDDADADAA RALKEAMPGI ESIVPRSKTR IVSTDTLILV ITRDFPAHPE K
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