9 homologs were found in PanDaTox collection
for query gene Francci3_2319 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_2319  hypothetical protein  100 
 
 
149 aa  285  2e-76  Frankia sp. CcI3  Bacteria  normal  0.0507937  normal  0.0699351 
 
 
-
 
NC_013595  Sros_5017  hypothetical protein  71.64 
 
 
169 aa  102  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.13713 
 
 
-
 
NC_013510  Tcur_0322  dual specificity protein phosphatase  69.35 
 
 
170 aa  84.3  6e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6060  hypothetical protein  57.89 
 
 
142 aa  65.9  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38720  hypothetical protein  63.27 
 
 
138 aa  65.5  0.0000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5761  hypothetical protein  48.44 
 
 
142 aa  53.5  0.000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0739346  normal  0.133561 
 
 
-
 
NC_013947  Snas_5897  dual specificity protein phosphatase  53.45 
 
 
144 aa  52.8  0.000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0844449 
 
 
-
 
NC_007777  Francci3_2695  dual specificity protein phosphatase  50 
 
 
183 aa  50.1  0.00001  Frankia sp. CcI3  Bacteria  normal  normal  0.524457 
 
 
-
 
NC_013131  Caci_0405  dual specificity protein phosphatase  43.86 
 
 
142 aa  49.7  0.00001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.163885  normal  0.562108 
 
 
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