Gene Francci3_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2695 
Symbol 
ID3904919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3181207 
End bp3181758 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID637880019 
Productdual specificity protein phosphatase 
Protein accessionYP_481785 
Protein GI86741385 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.524457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTCG TGAGCCTCGA CCCGACCGGG AGAAATGCTC TTCATCAACC GGTGTGTCGC 
GGCCGAGCCG CTGCCCGCCA CTTCCCGGTC CGCTGTCGCG ACGGACGTGG TGTTAGCATC
AGAACAATGA CGACATGGGA ACCTGGGGCG CCGGGAGTGT TGGCACTCCC GTCGGGCCGG
CTTATCCGCG GCAGGGGGCT GCGACAGCCG CTTCCGGACG GAAGTGAACC ATCGTTCGGA
CTGTACCTCG TGGGACGTCA ACCACCTGCG GTCCCCTGGG AGAGTCGGTG GATACGATGG
CCCGACTTCC GGCTGCCATC CGATCGAGAG GCCGCGGCAC GCAGCATTCA CGAAGCCTGG
ACGCGTGCGG ACTCGGAACG CGTCGAAATT GCGTGTTCCG GAGGAAAAGG GCGGACTGGA
ACGGCACTCG CCTGTATCGC CGTGCTCGAC GGAATCGCCC CGGGCGAGGC AGTTGACTAT
ATACGGACGA ACTATGCTCG CCATGCGGTG GAGACGCCTT GGCAGCATCG CTACGTTCGC
CGCTTCCAGT AG
 
Protein sequence
MAVVSLDPTG RNALHQPVCR GRAAARHFPV RCRDGRGVSI RTMTTWEPGA PGVLALPSGR 
LIRGRGLRQP LPDGSEPSFG LYLVGRQPPA VPWESRWIRW PDFRLPSDRE AAARSIHEAW
TRADSERVEI ACSGGKGRTG TALACIAVLD GIAPGEAVDY IRTNYARHAV ETPWQHRYVR
RFQ