11 homologs were found in PanDaTox collection
for query gene Dfer_0681 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_0681  hypothetical protein  100 
 
 
425 aa  882    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3783  hypothetical protein  49.88 
 
 
439 aa  405  1e-111  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2818  glycoside hydrolase family 28  24.7 
 
 
542 aa  57.8  0.0000004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3115  glycoside hydrolase family protein  25.91 
 
 
509 aa  55.8  0.000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29200  endopolygalacturonase  29.81 
 
 
431 aa  53.5  0.000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4088  glycoside hydrolase family protein  24.09 
 
 
522 aa  51.6  0.00003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.59776  n/a   
 
 
-
 
NC_013061  Phep_3113  glycoside hydrolase family 28  23.01 
 
 
524 aa  51.2  0.00003  Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.00001805  normal 
 
 
-
 
NC_012034  Athe_2380  Galacturan 1,4-alpha-galacturonidase  21.51 
 
 
447 aa  49.3  0.0001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3217  glycoside hydrolase family protein  21.96 
 
 
491 aa  47.8  0.0004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4784  glycoside hydrolase family 28  23.65 
 
 
551 aa  47  0.0006  Spirosoma linguale DSM 74  Bacteria  normal  0.821545  normal 
 
 
-
 
NC_009441  Fjoh_4247  glycoside hydrolase family protein  24.67 
 
 
448 aa  43.1  0.008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.783037  n/a   
 
 
-
 
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