| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4247 |
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| Symbol | |
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| ID | 5092289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5125269 |
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| End bp | 5126615 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644743671 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196574 |
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| Protein GI | 146301983 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.783037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATT TACTTCTATT ATTAATTTCC TATGTTTCAT TTGCTCAGCA AAATAATTTT
CCAAGAGCAA AAGCCGATTC AATAATAAGC AGAATTCAGC CTCCTGTATT TTCTGCTTAT
CAGGTTAATG TTTTAAAATT AGGAGCAAAA GGAGATTCTA TTACAAATAA CAAAGCTGTT
TTTGATAAAG CAATGGCTTT ATGTAAAAAG AAAGGCGGAG GAACTATTAT AGTACCAAAA
GGAATTTATA AAATAAATGG CCCTATCCAT TTTGTAAGCA ATGTAAATCT GAAAATTGAA
AAAGGAGCCA AGATAAAATT CAGCGACAAC CCTCAGGATT ATCCTTTAGT ATTGACAAGC
TGGGAAGGTA CAATGCTTTA TAATTACAGT CCGTTGATTT ATGCAGTTGA TTGTACCAAT
ATCGCTATAA CAGGAGTAGG AATAATTGAC GGCGAGGGAG GAAAAATATG GAAAAGTTTC
AAAGCTAAAG AAGGAGCAGG TAAAAACCTG AGCAGGGAAA TGAATCATAA TAATGTTCCT
GTAAGCGACA GAAAGTTTGG AGAAGGTTAC TTTTTGCGTC CGCAGATGAT CCAGTTTTTA
AATTGCAAAA ATATATTAGT AGAAAATGTT AGAATTGAAA ACTCGCCATT TTGGTGTCTG
CACCTTTTAA AATCACAAAA CATAACGGTT CGAGGCATCA GTTATAAATC ATTAAACTAT
AATAATGACG GAATTGATCC TGAATATGCA AAAGATGTTT TAATCGAAAA TGTGACTTTT
GACAATGGCG ACGACAATGT GGCTATAAAA GCCGGACGAG ATCATGAAGG AAGAGCTAAT
ACTGCATCGC CAAGCGAGAA TATCGTAATT AGGAACTGTA ACTTTAAAGG ACTGCACGGA
GTTGTCATTG GCAGTGAAAT GTCAGCAGGA GTACAAAATG TGTTTGTTGA AAACTGTAAA
ACCGCCGGCT ATTTAAAAAG AGGAATTTAT TTAAAGACCA ATGCAGACAG AGGAGGTTAC
ATCAAAAATG TGTTTGTTCA AAATTTACAA TTAGATGAAG TCGAAGATTG TCTTTATATA
ACAGCCAATT ATCATGGAGA AGGTGAAGGT TATCAGTCTG ATATTTCAAA TATCCATTTT
TCAAATATTA CATGTAATAG AGCATCAGAA TCAGGAATTG TCATTCAGGG ATTCTCCGAT
AAAAAAATCA GAAGCATATC CTTAAATAAT ATAGATATAA AAGAAGCAAA AAATGCCTTG
TCAAATGAAA ATGCAGAAAA TGTAATAATG ACTGATGTTT TTATAGGTAA AAGAGCAACT
GTGCCAACGG CGGTTTCAAA ACATTAA
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| Protein sequence | MKYLLLLLIS YVSFAQQNNF PRAKADSIIS RIQPPVFSAY QVNVLKLGAK GDSITNNKAV
FDKAMALCKK KGGGTIIVPK GIYKINGPIH FVSNVNLKIE KGAKIKFSDN PQDYPLVLTS
WEGTMLYNYS PLIYAVDCTN IAITGVGIID GEGGKIWKSF KAKEGAGKNL SREMNHNNVP
VSDRKFGEGY FLRPQMIQFL NCKNILVENV RIENSPFWCL HLLKSQNITV RGISYKSLNY
NNDGIDPEYA KDVLIENVTF DNGDDNVAIK AGRDHEGRAN TASPSENIVI RNCNFKGLHG
VVIGSEMSAG VQNVFVENCK TAGYLKRGIY LKTNADRGGY IKNVFVQNLQ LDEVEDCLYI
TANYHGEGEG YQSDISNIHF SNITCNRASE SGIVIQGFSD KKIRSISLNN IDIKEAKNAL
SNENAENVIM TDVFIGKRAT VPTAVSKH
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