10 homologs were found in PanDaTox collection
for query gene Cpin_6116 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_6116  helix-turn-helix domain protein  100 
 
 		 93 aa  187  5.999999999999999e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1178  hypothetical protein  43.84 
 
 		 102 aa  69.7  0.00000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000000151745  decreased coverage  0.00726901 
 
 
-
 
NC_009441  Fjoh_2677  helix-turn-helix domain-containing protein  38.46 
 
 		 87 aa  50.4  0.000008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.561977  n/a   
 
 
-
 
NC_009441  Fjoh_0911  XRE family transcriptional regulator  34.18 
 
 		 93 aa  50.1  0.00001  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1496  hypothetical protein  38.03 
 
 		 79 aa  48.5  0.00003  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.0000156922  normal  0.0221603 
 
 
-
 
NC_009253  Dred_0889  XRE family transcriptional regulator  37.68 
 
 		 210 aa  42.4  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_0529  XRE family transcriptional regulator  39.39 
 
 		 205 aa  42  0.003  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.00000109326  normal  0.171352 
 
 
-
 
NC_008255  CHU_0504  transcriptional regulator  30.99 
 
 		 75 aa  41.2  0.004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006368  lpp2326  hypothetical protein  39.68 
 
 		 87 aa  40.8  0.007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1052  hypothetical protein  39.68 
 
 		 84 aa  40.8  0.007  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
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