5 homologs were found in PanDaTox collection
for query gene CHU_1178 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_1178  hypothetical protein  100 
 
 
102 aa  208  2e-53  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000000151745  decreased coverage  0.00726901 
 
 
-
 
NC_013132  Cpin_6116  helix-turn-helix domain protein  43.84 
 
 
93 aa  69.7  0.00000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1496  hypothetical protein  31.08 
 
 
79 aa  52.8  0.000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.0000156922  normal  0.0221603 
 
 
-
 
NC_009441  Fjoh_2677  helix-turn-helix domain-containing protein  34.29 
 
 
87 aa  52.8  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.561977  n/a   
 
 
-
 
NC_009441  Fjoh_0911  XRE family transcriptional regulator  33.78 
 
 
93 aa  51.6  0.000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
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