9 homologs were found in PanDaTox collection
for query gene Fjoh_0911 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_0911  XRE family transcriptional regulator  100 
 
 
93 aa  192  2e-48  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2677  helix-turn-helix domain-containing protein  79.76 
 
 
87 aa  146  8e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  0.561977  n/a   
 
 
-
 
NC_008255  CHU_1178  hypothetical protein  34.29 
 
 
102 aa  51.2  0.000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000000151745  decreased coverage  0.00726901 
 
 
-
 
NC_013132  Cpin_6116  helix-turn-helix domain protein  33.85 
 
 
93 aa  48.1  0.00004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1496  hypothetical protein  35 
 
 
79 aa  47.4  0.00006  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.0000156922  normal  0.0221603 
 
 
-
 
NC_006369  lpl1052  hypothetical protein  36.9 
 
 
84 aa  43.1  0.001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_08540  predicted transcriptional regulator  36.23 
 
 
76 aa  43.5  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  hitchhiker  0.00102347 
 
 
-
 
NC_006368  lpp2326  hypothetical protein  38.24 
 
 
87 aa  42.7  0.002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3829  transcriptional regulator, XRE family  35.14 
 
 
201 aa  40.8  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.440396  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>