11 homologs were found in PanDaTox collection
for query gene Cpin_0296 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_0296  hypothetical protein  100 
 
 
289 aa  600  1.0000000000000001e-171  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0635  hypothetical protein  23.13 
 
 
285 aa  69.3  0.00000000007  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.890226  n/a   
 
 
-
 
NC_009972  Haur_1973  tail collar domain-containing protein  29.2 
 
 
934 aa  55.5  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3288  phage tail Collar  32.03 
 
 
175 aa  47.8  0.0002  Ruegeria sp. TM1040  Bacteria  normal  0.890287  normal 
 
 
-
 
NC_013530  Xcel_0519  Tail Collar domain protein  26.25 
 
 
443 aa  48.1  0.0002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2328  hypothetical protein  34.86 
 
 
199 aa  47  0.0004  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.00000000740366  normal  0.751095 
 
 
-
 
NC_008009  Acid345_2453  phage tail Collar  29.36 
 
 
166 aa  45.4  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.661314  normal 
 
 
-
 
NC_007912  Sde_3328  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase  29.01 
 
 
169 aa  44.7  0.002  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00435703 
 
 
-
 
NC_009441  Fjoh_2682  phage tail collar domain-containing protein  28.03 
 
 
169 aa  43.9  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0278651  n/a   
 
 
-
 
NC_008752  Aave_1917  phage tail collar domain-containing protein  27.22 
 
 
176 aa  43.1  0.006  Acidovorax citrulli AAC00-1  Bacteria  normal  0.319876  hitchhiker  0.0068131 
 
 
-
 
NC_010511  M446_3490  tail collar domain-containing protein  30.63 
 
 
178 aa  42.4  0.009  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.310018 
 
 
-
 
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