| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3328 |
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| Symbol | |
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| ID | 3965877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4256440 |
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| End bp | 4256949 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922425 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
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| Protein accession | YP_528795 |
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| Protein GI | 90022968 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4675] Microcystin-dependent protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00435703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAC CTTTTTTAGC AGAAGTCAAG GTGGTTGGCT TTAATTTCGC CCCGCGCGGC
TGGGCCTTTT GCGATGGGCA AATAATGCAG ATTAGCCAGA ATCAATCGCT CTACTCTTTA
TTGGGCACAA ATTATGGTGG TGATGGTCGT ACGTCGTTTG CTCTGCCCGA CATACGTGGC
CGTACACCTA TTCATAGAAC CGATGGCCAC GCGTTGGGGC AGAAGGGCGG CAGTGAAGTT
GTAACGCTTA CAGCTGCTCA AATTCCAGCA CATAATCATG CTGTAAAGGC TAGTACTAGC
GCGGCAAACG TGTTGCCTGT TGGCGATACT GCCGTTTTAG CGGATACCAG TAGAGACCTT
TATGCCGACG CAAGCCCCGC TAATTTAGCT GCGTTAAATA GCGGCACCAT CGCTAATACT
GGCGGAGGCC AAGCGCATAA TAATATGCAA CCTTATTTAA CGTTAAGTTA CTGCATTGCC
CTGCAAGGGC TCTTTCCTTC TAGAAATTAA
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| Protein sequence | MSEPFLAEVK VVGFNFAPRG WAFCDGQIMQ ISQNQSLYSL LGTNYGGDGR TSFALPDIRG
RTPIHRTDGH ALGQKGGSEV VTLTAAQIPA HNHAVKASTS AANVLPVGDT AVLADTSRDL
YADASPANLA ALNSGTIANT GGGQAHNNMQ PYLTLSYCIA LQGLFPSRN
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