| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3288 |
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| Symbol | |
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| ID | 4075692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 293419 |
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| End bp | 293946 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004797 |
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| Product | phage tail Collar |
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| Protein accession | YP_611524 |
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| Protein GI | 99078266 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4675] Microcystin-dependent protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.890287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC CTTTCATCGC TGAGATACGG ATCTTTGCCG GGAATTTTGC GCCGCGCAGC
TGGGCTTTTT GTGACGGCCA GCTTTTGCCG GTCTCTCAGA ACACAGCGCT GTTTTCCTTG
ATCGGCACCA CCTATGGCGG CGATGGTCGC ACGACAACTG CGCTGCCCAA TCTGCAGGGA
CGCGCACCGA TGCACCCGGG GCGCGGTCCC GGCCTCACCG ACCGCCGCCT CGGCCAGCGT
GGCGGCAGTG AAAACGTGAC CTTGAGCGAA GCGCAACTGC CCAACCACAC CCATTCAGGC
ATCGCCAGCC TGGACACGTC GAGCACTGGC ACTCCAAGCG ATACAACCAC GCTTGGCGAT
ACCGGCTTTG ACAACCTTTA CCAGACGGCG ACCGGGACCA ATCTGGTCGA CCTTGCCCCA
GAGGCCCTGC CCAACACGGG TGGCGGCGCG GCGCACCAGA ACATGCAGCC TTATCTTACC
TTGAATTTCA TTATCGCGCT TCAGGGCCTT TACCCGTCAC GCAGTTAA
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| Protein sequence | MSEPFIAEIR IFAGNFAPRS WAFCDGQLLP VSQNTALFSL IGTTYGGDGR TTTALPNLQG
RAPMHPGRGP GLTDRRLGQR GGSENVTLSE AQLPNHTHSG IASLDTSSTG TPSDTTTLGD
TGFDNLYQTA TGTNLVDLAP EALPNTGGGA AHQNMQPYLT LNFIIALQGL YPSRS
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