Gene Cpin_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0296 
Symbol 
ID8356401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp340396 
End bp341265 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content48% 
IMG OID644962442 
Producthypothetical protein 
Protein accessionYP_003119996 
Protein GI256419343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG TAGAACAACT CACAAACCTC GGCGGGTTTC CTATGACCCA GTATACGCTG 
GACTTCATGC AACAGTCATA CCGGGATGCA CTGGGCGCAC TGGCCAAACT TGTTGGCAGC
GCTGTAATAG TGTCAGGTAT GGAAGAAACC GGCAATAATG TGGCCAATGG ATGGATCAGC
TACAACGGCG AATTGATTCC CTTCACAGGC GGCCCTAAAC AATCAACCTG GATCATTGAA
GATGCAACAG AAGATCGTCT CTTTGCTGAT CAGGTGAGCC GCACTGTTTA CTTTACCCGC
AAGGCTAGGT TTGCAGCTGG TGGCTTCAAT TATAGCAACC TGCAACGTAT AGAAACGCTG
ATAGGACTCA AAGGCGTGAT CGCATCACTG GACTCCCGTC TTACACAACA GGTGCAGAAC
GTATGGAAAA GAGGCGACAT TATCGAAGTG GATTGCAGCA CCGCCTATAT TCAAACAAAC
TTTGATGGCA CTGGCCTCGG AAGAAATGAA AGAACGGGCT GGGCGATCTG TAACGGTAAC
AACGGCACCA GAAATCGTGG AGGCAGATTC CCTGTTGGAT ATGATCCTTT CAGAGGTGAA
TACAATACCG TCGGTAATAT CGGCGGACAG GAAGCTGTAA CGCTCTCCGT AGCACAGCTG
CCACCGCACA TGCACACAGG TAATAAACAG GTCTCCGCAA GAGGATGGCC TGATGATTCC
GGCGACAGAA CAGATAACTA TTATTACATC CACTCTTCCA GAGATAGCTG GCAATTCATG
CAAACCTTTG ACACAACCTA CACCGGGTCA GGACAATCGC ACGAAAACCG TCCACCATAC
ATTGTTACGC TCTGGATAAT GAAATTATAA
 
Protein sequence
MNKVEQLTNL GGFPMTQYTL DFMQQSYRDA LGALAKLVGS AVIVSGMEET GNNVANGWIS 
YNGELIPFTG GPKQSTWIIE DATEDRLFAD QVSRTVYFTR KARFAAGGFN YSNLQRIETL
IGLKGVIASL DSRLTQQVQN VWKRGDIIEV DCSTAYIQTN FDGTGLGRNE RTGWAICNGN
NGTRNRGGRF PVGYDPFRGE YNTVGNIGGQ EAVTLSVAQL PPHMHTGNKQ VSARGWPDDS
GDRTDNYYYI HSSRDSWQFM QTFDTTYTGS GQSHENRPPY IVTLWIMKL