13 homologs were found in PanDaTox collection
for query gene Cmaq_1539 on replicon NC_009954
Organism: Caldivirga maquilingensis IC-167



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009954  Cmaq_1539  DNA-directed RNA polymerase subunit L  100 
 
 		 104 aa  209  1e-53  Caldivirga maquilingensis IC-167  Archaea  normal  0.111893  normal  1 
 
 
-
 
NC_008701  Pisl_1802  DNA-directed RNA polymerase subunit L  41.38 
 
 		 89 aa  83.6  9e-16  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.20562  normal  0.258575 
 
 
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NC_009073  Pcal_1589  DNA-directed RNA polymerase, subunit L  42.17 
 
 		 89 aa  79.3  0.00000000000002  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_2053  DNA-directed RNA polymerase subunit L  40.96 
 
 		 89 aa  78.6  0.00000000000003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  0.502019 
 
 
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NC_010525  Tneu_0819  DNA-directed RNA polymerase subunit L  43.37 
 
 		 89 aa  78.6  0.00000000000003  Thermoproteus neutrophilus V24Sta  Archaea  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_0004  RNA polymerase, dimerisation  34.15 
 
 		 91 aa  48.9  0.00002  Methanosaeta thermophila PT  Archaea  normal  0.627074  n/a   
 
 
-
 
NC_007355  Mbar_A1637  DNA-directed RNA polymerase, subunit L  31.43 
 
 		 92 aa  47.4  0.00008  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_1439  DNA-directed RNA polymerase, subunit L  28.05 
 
 		 91 aa  47.4  0.00008  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_008698  Tpen_0364  Fis family transcriptional regulator  36.62 
 
 		 101 aa  47  0.00008  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
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NC_009046  PICST_62535  RNA polymerase II core subunit  24.39 
 
 		 122 aa  45.8  0.0002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.185842  normal  1 
 
 
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NC_013926  Aboo_1383  DNA-directed RNA polymerase subunit L  33.33 
 
 		 93 aa  43.5  0.001  Aciduliprofundum boonei T469  Archaea  normal  0.0489721  n/a   
 
 
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NC_009712  Mboo_0484  RNA polymerase, dimerisation  28.41 
 
 		 91 aa  42.4  0.002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.295955  normal  1 
 
 
-
 
NC_008942  Mlab_1248  DNA-directed RNA polymerase, subunit L  32.94 
 
 		 94 aa  42  0.003  Methanocorpusculum labreanum Z  Archaea  hitchhiker  0.000851201  normal  1 
 
 
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