9 homologs were found in PanDaTox collection
for query gene Pcal_1589 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009073  Pcal_1589  DNA-directed RNA polymerase, subunit L  100 
 
 		 89 aa  179  1e-44  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_2053  DNA-directed RNA polymerase subunit L  80.68 
 
 		 89 aa  150  7e-36  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  0.502019 
 
 
-
 
NC_008701  Pisl_1802  DNA-directed RNA polymerase subunit L  75 
 
 		 89 aa  142  2e-33  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.20562  normal  0.258575 
 
 
-
 
NC_010525  Tneu_0819  DNA-directed RNA polymerase subunit L  73.86 
 
 		 89 aa  141  3e-33  Thermoproteus neutrophilus V24Sta  Archaea  normal  1  normal  1 
 
 
-
 
NC_009954  Cmaq_1539  DNA-directed RNA polymerase subunit L  42.17 
 
 		 104 aa  79.3  0.00000000000002  Caldivirga maquilingensis IC-167  Archaea  normal  0.111893  normal  1 
 
 
-
 
NC_013926  Aboo_1383  DNA-directed RNA polymerase subunit L  49.02 
 
 		 93 aa  51.6  0.000004  Aciduliprofundum boonei T469  Archaea  normal  0.0489721  n/a   
 
 
-
 
NC_008698  Tpen_0364  Fis family transcriptional regulator  36.49 
 
 		 101 aa  50.8  0.000007  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_006684  CNB02280  DNA-directed RNA polymerase ii 13.3 kda polypeptide, putative  31.43 
 
 		 162 aa  41.2  0.004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.17103  n/a   
 
 
-
 
NC_007355  Mbar_A1637  DNA-directed RNA polymerase, subunit L  29.07 
 
 		 92 aa  40.4  0.009  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>