Gene Pisl_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1802 
Symbol 
ID4617941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1635526 
End bp1635795 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content43% 
IMG OID639784886 
ProductDNA-directed RNA polymerase subunit L 
Protein accessionYP_931294 
Protein GI119873287 
COG category[K] Transcription 
COG ID[COG1761] DNA-directed RNA polymerase, subunit L 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.20562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.258575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGT TAGAGATTCT TAAGCTAGAT GATAAATATC TTGAGGTAAA AGTCAGGGGG 
GAGACCTATA CGTTGTTTTC TCCGCTGGTT GAATATCTAT CTAACGACCC GGATGTGGAG
TATGTCCAAT TTGACGTAGA CCACCCGCTC CAGGAGAACG TGTATTTTAA AGTGAAGGTG
AGGAGGGGGA ATCCTATAGA GGTTGTGCAG AGAGCTGTTA ACGCCATAAT TTCAGACTTA
GAGGAGCTTG AGAAAAGTTT CTTTTCGTGA
 
Protein sequence
MLQLEILKLD DKYLEVKVRG ETYTLFSPLV EYLSNDPDVE YVQFDVDHPL QENVYFKVKV 
RRGNPIEVVQ RAVNAIISDL EELEKSFFS