21 homologs were found in PanDaTox collection
for query gene Ccel_3115 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_3115  transcriptional regulator, XRE family  100 
 
 
107 aa  213  7e-55  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0430  helix-turn-helix domain-containing protein  40.38 
 
 
356 aa  44.3  0.0005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177138  hitchhiker  0.0000000020389 
 
 
-
 
NC_013421  Pecwa_0549  transcriptional regulator, XRE family  44.64 
 
 
103 aa  43.5  0.001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1650  DNA-binding protein  32.22 
 
 
181 aa  42.4  0.002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000412674  n/a   
 
 
-
 
NC_013525  Tter_0866  helix-turn-helix domain protein  28.7 
 
 
140 aa  42.7  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008942  Mlab_0071  XRE family transcriptional regulator  42.86 
 
 
161 aa  42.4  0.002  Methanocorpusculum labreanum Z  Archaea  normal  hitchhiker  0.000421347 
 
 
-
 
NC_007530  GBAA_1781  DNA-binding protein  32.22 
 
 
181 aa  42.4  0.002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_04053  Transcriptional Regulator, XRE family protein  44.64 
 
 
106 aa  41.6  0.003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1795  DNA-binding protein  32.22 
 
 
181 aa  41.6  0.003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1831  DNA-binding protein  32.22 
 
 
181 aa  42  0.003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1629  MerR family transcriptional regulator  32.22 
 
 
181 aa  41.6  0.003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.000044317  n/a   
 
 
-
 
NC_011658  BCAH187_A1906  DNA-binding protein  32.22 
 
 
181 aa  41.6  0.004  Bacillus cereus AH187  Bacteria  hitchhiker  0.0011859  n/a   
 
 
-
 
NC_011772  BCG9842_B3546  DNA-binding protein  32.22 
 
 
181 aa  41.6  0.004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1854  DNA-binding protein  32.22 
 
 
181 aa  41.6  0.004  Bacillus cereus ATCC 10987  Bacteria  normal  0.653009  n/a   
 
 
-
 
NC_009712  Mboo_2112  helix-turn-helix domain-containing protein  37.5 
 
 
162 aa  41.2  0.005  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_013037  Dfer_1368  transcriptional regulator, XRE family  34.88 
 
 
189 aa  40.8  0.006  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000513137  normal  0.127219 
 
 
-
 
NC_010511  M446_3867  XRE family transcriptional regulator  41.38 
 
 
201 aa  40.8  0.007  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02750  predicted transcriptional regulator  43.1 
 
 
215 aa  40.4  0.008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_2739  transcriptional regulator, XRE family  27.27 
 
 
162 aa  40  0.009  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.760407 
 
 
-
 
NC_012034  Athe_2434  transcriptional regulator, XRE family  37.29 
 
 
77 aa  40.4  0.009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3477  transcriptional regulator, XRE family  40 
 
 
737 aa  40  0.01  Actinosynnema mirum DSM 43827  Bacteria  normal  0.552103  n/a   
 
 
-
 
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