| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3477 |
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| Symbol | |
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| ID | 8327667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4042404 |
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| End bp | 4044617 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644943977 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003101217 |
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| Protein GI | 256377557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.552103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAGCG AGTTAGGCCC TTCGCTCCGC CGGGCGCGGC GTTCGGCGGG GCTCACCCAG
GAGCAGCTCT CGGCAGCTTC CGGGATCAGC GTGCGGACCA TCAGCAGGCT GGAGAACGGC
GCCGACGAGA ACGTCCGGCT CGACACCCTG CGGCTGCTGG CCGACGCGCT CGGGCTCACG
CAGGCGGAGC GCCGTGAGCT GATGGCGGGG GTGGTGGCCG GGGAAGCCGC CGTCCCGACC
GGTCCGCTGG CGGTTGCGGC GCAGCAGCTC GCCGAGGTGC TGCGGGGGCG GTGGCTGCGG
GAGGTCGAGG CGCGGGCCGC GCACCACCCG TTCCCGCTGC CGGTGCGGTG GCGGGCCGCG
CCCGGGGAGC TGGTCGACCA CTGGGCCAAC GTGCTGGGCG CGCCACCGGG CGCGCAGGTG
CGGCCGGTGG CGCTGGCGGG TGACCTCGGC CAGGTCGTGG ACGTCTACCG GTCGGTGCCC
TCAGGCAGGC TGGTGGTGCT CGGGCGCGCG GGTGCGGGCA AGTCGGTGCT GGCCCTGCGC
TTCGCCCTGG ACCACCTGGA CGTCCGCGCT CCAGGTGACC CGGTGCCGGT GGTCTTCAGC
GTGGGCGCGT GGGACCCGAG CGCCACCGGA CTGCGGGACT GGCTGGTGGC GCGGCTGCTG
CGCGACCACC CCGACCTGGC CGCGCCCGCC CCCGACGGCA CGGCCCTGGC GGGCGCGCTG
GTCGACGCGG GCCGGGTGCT GCCGGTGCTG GACGGGTTCG ACGAGATCGC CGGGCGGTTG
CGCGGCCCCG CGCTGACGGC GCTCAGCGCG ACCTCGCTGC CGGTGCTGCT GACCAGCCGC
CCTGACGAGT ACCGGGACGC GGTCGAGCGC GCGGGCAGGC TGTCCGCCGC CGCGGGCATC
CGGGTCGAGG ATCTGACGGT CGCCGACTCG GCCGAGCACC TGCGCCGTTC AAGCCGGGCG
GGCCGCTGGG AACCGGTGCT CACCGCCCTG CGCGAGCGCC CAGGCGACCC GGCCTGCGTG
AACCTGACCG CCGTGCTCGG CACGCCGCTG ATGGTCGTGC TCGCCCGCAG CGTCCACGGC
GACACCGGTG AACCGCCCGA GGCCCTGCTG GACCGCACCC GGTTCCCCAC CGCGCGCGAG
CTGGAGCGGC ACCTGCTGGA CCGGTTCGTG CCCACCGCCT ACGGCCCGCA CACCGGGGGC
CGCGGGGAGA CGCCGCAGCG GGCCCGGCGC TGGTTGGGGA ACCTGGCCCG GCACCTGGAG
CGGCTGGACA CCCCGGACCT GGCGTGGTGG CAGCTGGAGT CCGCGCTCGG CCGACCGGCG
CGGCTGCTCG GGGCGGGGCT GGTGTCGGCG GTGACGGCGA CGCTCGCCAC GCTGCTGGTG
TTCCTGCCGC AGTACGTGGT GGCCTTCGGG TTCGAGCGCG GGCTGCGGGC CGTGCTGGTG
GAGGCGGTGC TGTTCGGACC CGTGGTGGGG CTGGGGGTCG GGCTGGCGCA CGCGGTCGTG
GTCGCGCGGG GCGGTGGCGC GTTCGAGCCG TCGCGGGTGC GGGTGCGGCT GTCCGGGTGG
CGTGGGCCGG TGTTCGCGCG GCGGGGGAGC GCGGGGTTCC TCGGCGGGGT CGCGGTGGGG
ATCGCGCAGC AGCCCGCGTC GCTGCTGGCG CTCGCCGTGC TGGGCGCGCT GCCGGGGTCG
CTGCGGGAGC AGGTGCGGAT GGCGGTGGTG GACGCGCTCG TGCTGGGCCT GGTGTACGGG
GTGGCGGTGG GGGCGGTCTT CGCGCTCACC TCGGTGCTGG AGGCGCCGGT CGACCTGGAC
GCGGCGCTGA GCCCGTCCGC CGTGCTGCGC ACCGACCGCA CGACCGTGTT GAGCCGGGTG
GCCGTGCTCG TGCCGGTGTT CGTGCTGGCG ATCGCGTTCG GGGGGACGCT GGTGACGGCG
CTGCTCCAAC CGCTGGTCGG CCCGCTCGTC TGGCCGCTGG ACCAGGGGCT GTCCTTGGGG
CTTACGGGTG CGCTGACCTG CGCTTCCGCC TACGTCTTCA CCTTCACCGC GTGGGGCCGC
TGGCTGCTGT TCACCCGGTT CTGGCTGCCG CTCACGGGCA GGTTGCCGTG GTCGGTGCTC
GGGTTCCTGG ACGACGCGCG CCGCCGGGGC GTGCTGCGGC GGACCGGGGC CGTGCACCAG
TTCCGGCACG CGCGGTTGCA GGACCAGCTC GCCGAGGTGG CCGAGAAGAC GTGA
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| Protein sequence | MTSELGPSLR RARRSAGLTQ EQLSAASGIS VRTISRLENG ADENVRLDTL RLLADALGLT
QAERRELMAG VVAGEAAVPT GPLAVAAQQL AEVLRGRWLR EVEARAAHHP FPLPVRWRAA
PGELVDHWAN VLGAPPGAQV RPVALAGDLG QVVDVYRSVP SGRLVVLGRA GAGKSVLALR
FALDHLDVRA PGDPVPVVFS VGAWDPSATG LRDWLVARLL RDHPDLAAPA PDGTALAGAL
VDAGRVLPVL DGFDEIAGRL RGPALTALSA TSLPVLLTSR PDEYRDAVER AGRLSAAAGI
RVEDLTVADS AEHLRRSSRA GRWEPVLTAL RERPGDPACV NLTAVLGTPL MVVLARSVHG
DTGEPPEALL DRTRFPTARE LERHLLDRFV PTAYGPHTGG RGETPQRARR WLGNLARHLE
RLDTPDLAWW QLESALGRPA RLLGAGLVSA VTATLATLLV FLPQYVVAFG FERGLRAVLV
EAVLFGPVVG LGVGLAHAVV VARGGGAFEP SRVRVRLSGW RGPVFARRGS AGFLGGVAVG
IAQQPASLLA LAVLGALPGS LREQVRMAVV DALVLGLVYG VAVGAVFALT SVLEAPVDLD
AALSPSAVLR TDRTTVLSRV AVLVPVFVLA IAFGGTLVTA LLQPLVGPLV WPLDQGLSLG
LTGALTCASA YVFTFTAWGR WLLFTRFWLP LTGRLPWSVL GFLDDARRRG VLRRTGAVHQ
FRHARLQDQL AEVAEKT
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