Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2112 |
Symbol | |
ID | 5411210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2187045 |
End bp | 2187533 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869357 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001405269 |
Protein GI | 154151651 |
COG category | [K] Transcription |
COG ID | [COG4800] Predicted transcriptional regulator with an HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCGA AACGGATATT TGAGATCGAT TTCACTACGG CCCTCAACGA AGAACTGGAA CGCAAGAACC TGACGGTAAA AGAGCTCGCG GAACTGACCG GTATCCCTGT TTCTACCCTG TACAAAGTGA CGGTGGGGGA GCGGGATCCC CGCCTATCCA CGGTAAAAAA GATCGTGTCT GTATTAGAAC CGGAGCGCAA CCGGTTTATC GCGGTGATTG CGGCAAAATT CCTGCTCGAT TCTTTTACCA CCCGGGAAGT GGAAGCCGGG GGGCAGAAAT ATGTCATACG GGGGTACTCC GCTCACTCCC TTGACGAATG CATTGTCGCT GCCGCCCGGG CGGAAAAGGA CGGGGCATCG GGGATCATCT GCGCCCCGAT CCTTGCAACG ATGGTCGAGA AGATTGTCGA TGTACCCGTG GGAATGCTCC GCCCCGAACT CTCCTGCGTG GATGAAGCTA TCGACGCTGT ACTCAGAAAG GTCGGATAA
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Protein sequence | MFSKRIFEID FTTALNEELE RKNLTVKELA ELTGIPVSTL YKVTVGERDP RLSTVKKIVS VLEPERNRFI AVIAAKFLLD SFTTREVEAG GQKYVIRGYS AHSLDECIVA AARAEKDGAS GIICAPILAT MVEKIVDVPV GMLRPELSCV DEAIDAVLRK VG
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