Gene Mboo_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2112 
Symbol 
ID5411210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2187045 
End bp2187533 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID640869357 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001405269 
Protein GI154151651 
COG category[K] Transcription 
COG ID[COG4800] Predicted transcriptional regulator with an HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGA AACGGATATT TGAGATCGAT TTCACTACGG CCCTCAACGA AGAACTGGAA 
CGCAAGAACC TGACGGTAAA AGAGCTCGCG GAACTGACCG GTATCCCTGT TTCTACCCTG
TACAAAGTGA CGGTGGGGGA GCGGGATCCC CGCCTATCCA CGGTAAAAAA GATCGTGTCT
GTATTAGAAC CGGAGCGCAA CCGGTTTATC GCGGTGATTG CGGCAAAATT CCTGCTCGAT
TCTTTTACCA CCCGGGAAGT GGAAGCCGGG GGGCAGAAAT ATGTCATACG GGGGTACTCC
GCTCACTCCC TTGACGAATG CATTGTCGCT GCCGCCCGGG CGGAAAAGGA CGGGGCATCG
GGGATCATCT GCGCCCCGAT CCTTGCAACG ATGGTCGAGA AGATTGTCGA TGTACCCGTG
GGAATGCTCC GCCCCGAACT CTCCTGCGTG GATGAAGCTA TCGACGCTGT ACTCAGAAAG
GTCGGATAA
 
Protein sequence
MFSKRIFEID FTTALNEELE RKNLTVKELA ELTGIPVSTL YKVTVGERDP RLSTVKKIVS 
VLEPERNRFI AVIAAKFLLD SFTTREVEAG GQKYVIRGYS AHSLDECIVA AARAEKDGAS
GIICAPILAT MVEKIVDVPV GMLRPELSCV DEAIDAVLRK VG