10 homologs were found in PanDaTox collection
for query gene Ccel_2857 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_2857  HNH endonuclease  100 
 
 
175 aa  360  4e-99  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000321269  n/a   
 
 
-
 
NC_008530  LGAS_0604  homing nuclease  36.13 
 
 
243 aa  65.9  0.0000000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000399673  normal 
 
 
-
 
NC_008530  LGAS_0666  homing nuclease  36.13 
 
 
243 aa  65.9  0.0000000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000000787061  normal 
 
 
-
 
NC_004116  SAG1876  prophage LambdaSa2, HNH endonuclease family protein  30.39 
 
 
176 aa  63.9  0.000000001  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00409455  n/a   
 
 
-
 
NC_012918  GM21_1450  HNH endonuclease  34.97 
 
 
174 aa  63.2  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1962  HNH endonuclease  30.86 
 
 
190 aa  61.2  0.000000008  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3832  NUMOD4 domain-containing protein  27.98 
 
 
179 aa  58.5  0.00000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000000542576 
 
 
-
 
NC_012856  Rpic12D_2277  hypothetical protein  32.43 
 
 
257 aa  50.8  0.00001  Ralstonia pickettii 12D  Bacteria  normal  0.110769  hitchhiker  0.0000150727 
 
 
-
 
NC_007493  RSP_6243  putative endonuclease  34.57 
 
 
161 aa  47  0.0001  Rhodobacter sphaeroides 2.4.1  Bacteria  unclonable  0.0000281378  n/a   
 
 
-
 
NC_011894  Mnod_3568  HNH endonuclease  27.18 
 
 
214 aa  45.1  0.0005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>