Gene Daci_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1962 
Symbol 
ID5747520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2149703 
End bp2150275 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content40% 
IMG OID641297041 
ProductHNH endonuclease 
Protein accessionYP_001562987 
Protein GI160897405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT TAGAGAAATT AACGCATGAA GATGAAATAT GGTCGGATAC GGAGTATCCG 
AACTATGCAA TATCCTCACA TGGCAGGCTG AAAAGAAATG AATACGTATC AACCATAGCT
GGCGGATTAA ATAGAAAATA TAAGGAGAAA ATATTTACTG GGAACATCCA TGAGAATGGT
TATCTATACG TATCACTAAA ACCTCACAGG AGCCAAGCAC CTGTGCACGA ACTTGTCGCG
AAGGCATTCC TGGGAGATAT GCCAGAAAAG GCAAGAACAG TAAATCATAT AGACGGAGAC
AAGCTAAACA ACCGCTCTTC AAACTTAGAA TGGGCTACAT ACGCCGAAAA TAACAGACAT
GCAAGAAAAA TGCTGCTAAA TATGCAGCAT GGGGAAGTAT GCAACTTGAC AAAGTTTAGT
GACAATATAG TAGATGCTGT AAGGATTCTT TATTCATCAC GGAGATTTAC AGCAAAAGAG
ATAGGAGGAT TTTTTAACAT GTCTCCTACT CATGTATACG AGATATCAAG CTTGAAGAGC
AGGGCAAGAC GATCCACCCA TAAGGAAAAG TGA
 
Protein sequence
MNSLEKLTHE DEIWSDTEYP NYAISSHGRL KRNEYVSTIA GGLNRKYKEK IFTGNIHENG 
YLYVSLKPHR SQAPVHELVA KAFLGDMPEK ARTVNHIDGD KLNNRSSNLE WATYAENNRH
ARKMLLNMQH GEVCNLTKFS DNIVDAVRIL YSSRRFTAKE IGGFFNMSPT HVYEISSLKS
RARRSTHKEK