Gene LGAS_0604 details

Gene Information

• Locus tag: LGAS_0604
• ID: 4440196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus gasseri ATCC 33323
• Kingdom: Bacteria
• Replicon accession: NC_008530
• Strand: +
• Start bp: 616529
• End bp: 617260
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 639672461
• Product: homing nuclease
• Protein accession: YP_814436
• Protein GI: 116629264

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00000399673
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 117
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATAATA ATATAGAAAT TTGGAAAGAC GTTCAAGGCT ATGAGGGGCT TTATCAGGTG 
TCAAATCTTG GAAGAGTAAA AAGTTTGTAT AAAAATACTA AGATTCTTAT GCCTAGATTA 
AATAACCGTG GGTATCAGTA TGTAATGTTT TTTAAAGACA AAAAATATAA GCATTTTTTA 
GTTCATAGAT TAGTAGCACA AGCTTTTATC CCTAATCCTA ATAAGTTACC TCAAGTAAAT 
CATATTGATG AAAATAAAGA AAACAATTGT ATTAGCAATT TAGAATGGTG TACAAACATT 
TATAACAATC TATATCGTGG CAAAGTTAAA AGAGCTGGAA TAAAGAACGG TATATGTGTT 
GCTCAATATA ATTTAAAAGG CAAATTAGTT AAAGTGTGGA ATTCTGCGCA TGAAGCTTCT 
AAAGAAGGCT ACAATGCTAG CCACATAAGA GAGTGTTGCT TAGGACAAGC ACAAACTCAT 
AATAATTATA TGTGGCGATC AGTCAGTAAC AATCATGTAA TTAAAAAGAT TGAGCCATAT 
CAAAAAACAA GTTTTACTAA TCGTTCAGAT TTAAGTGAAA ACATTGGTCA ATATGATATT 
GATGGCAATT TGATAAAGGT TTGGCCATCA ATAAGAGAAG CTTCAAGAAA AGGATTCGAT 
CGTAGCAGTA TTTCATATCA TATAAAAAAT AAAAAACCAT ATAAAGGTTA TATTTGGAAT 
TTAATGAAAT AA 

 

Protein sequence

MNNNIEIWKD VQGYEGLYQV SNLGRVKSLY KNTKILMPRL NNRGYQYVMF FKDKKYKHFL 
VHRLVAQAFI PNPNKLPQVN HIDENKENNC ISNLEWCTNI YNNLYRGKVK RAGIKNGICV 
AQYNLKGKLV KVWNSAHEAS KEGYNASHIR ECCLGQAQTH NNYMWRSVSN NHVIKKIEPY 
QKTSFTNRSD LSENIGQYDI DGNLIKVWPS IREASRKGFD RSSISYHIKN KKPYKGYIWN 
LMK