13 homologs were found in PanDaTox collection
for query gene CPF_0939 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008261  CPF_0939  RecT family protein  100 
 
 		 289 aa  590  1e-168  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_1419  phage recombinase  37.12 
 
 		 311 aa  171  1e-41  Haemophilus somnus 129PT  Bacteria  decreased coverage  0.000000444725  n/a   
 
 
-
 
NC_009616  Tmel_1472  recombination and repair protein RecT  33.06 
 
 		 300 aa  107  2e-22  Thermosipho melanesiensis BI429  Bacteria  normal  0.515262  n/a   
 
 
-
 
NC_009674  Bcer98_2617  recombination and repair protein RecT  32.03 
 
 		 268 aa  101  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.000206281  n/a   
 
 
-
 
NC_008531  LEUM_1674  recombinational DNA repair protein (RecE pathway)  29.54 
 
 		 310 aa  100  2e-20  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1382  recombination and repair protein RecT  27.42 
 
 		 276 aa  84  0.000000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00000000000000254024 
 
 
-
 
CP001509  ECD_01326  recombination and repair protein  26.46 
 
 		 269 aa  81.3  0.00000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_2295  RecT protein  26.46 
 
 		 269 aa  81.3  0.00000000000002  Escherichia coli DH1  Bacteria  decreased coverage  0.0000133363  n/a   
 
 
-
 
NC_012892  B21_01336  hypothetical protein  26.46 
 
 		 269 aa  81.3  0.00000000000002  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_7123  RecT protein  27.41 
 
 		 351 aa  78.6  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.0610415  hitchhiker  0.000150871 
 
 
-
 
NC_013411  GYMC61_0604  recombination and repair protein RecT  28.35 
 
 		 281 aa  76.6  0.0000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010084  Bmul_1851  RecT protein  25.6 
 
 		 349 aa  66.6  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0204847  decreased coverage  0.000000000311645 
 
 
-
 
NC_009380  Strop_4008  RecT protein  25.98 
 
 		 299 aa  42.4  0.01  Salinispora tropica CNB-440  Bacteria  normal  0.275216  normal  1 
 
 
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