| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4008 |
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| Symbol | |
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| ID | 5060489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4558177 |
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| End bp | 4559076 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476268 |
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| Product | RecT protein |
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| Protein accession | YP_001160816 |
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| Protein GI | 145596519 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3723] Recombinational DNA repair protein (RecE pathway) |
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| TIGRFAM ID | [TIGR00616] recombinase, phage RecT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.275216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CCGTCTCACA GGCCGTGGCC ACCCGGGACA ACTCCCCGGC CGGCTTGATC
ACGCAGTACT CCGAGTCGTT CGCCCAGGTA TTGCCGTCGC ACATCAAGCC GGCCACGTGG
GTTCGGCTGG CCCAGGGCGC GCTTAAGCGC GGCAAGCGTG GCGACGGTGG CCGGTTCGAG
TTGGAGATCG CCGCCTCGAA CAACCCGGGC GTGTTCCTCG CCGCGCTGCT CGACGCCGCC
CGGCAGGGCC TGGAGCCTGG CACTGAGCAG TACTACCTCA CCCCGCGGAA AGTGAAGGGC
CGGCTGGAGA TCCTAGGGAT CACCGGCTAC CAGGGGCACA TCGAGTTGAT GTACCGGGCC
GGGGCGGTTG CCTCGGTGGT CGCCGAGATC GTGCGAGAGC ACGACGAGTA CCGCTACCAG
CGCGGCATCG ACGACGTGCC GGTGCACCGA TACAAGCCGT TCGCCCGCGA CGCCGAACGC
GGCGCCCTGA TCGGCGTGTA CGCATACGCC CGCATGAAGG ACGGCGCGGT GTCCCGGGTT
GTCGAGCTGA GCCGCGACGA CATCGACCGC ATCAAGGCCA GCAGCCAGGG CGCGAACAGC
GAGTACAGCC CGTGGCAGAA GCACGAGGCC GCCATGTGGC TCAAGTCGGC GGTACGGCAG
TTGCAGAAGT GGGTGCCCAC GTCGGCGGAG TTCCGGCGGG AGCAACTACG CGCCGCGGCT
GAGGCCCACC GGGTCGCGTC CGCGGCGGAC GCCCCGGACG GCGCCACTGC ACCGCAGGGC
GACGTCCTGG ACGGTGAGGT ACTCGACGAG GCACCCACCG AGCCGGCGCG ATCCGATGAT
GCCGGCGGGC ATGTCGAGCA GGAGTGGCCG GACGCCGCGC GGCCGGGAGG TGCCCAGTGA
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| Protein sequence | MTQTVSQAVA TRDNSPAGLI TQYSESFAQV LPSHIKPATW VRLAQGALKR GKRGDGGRFE
LEIAASNNPG VFLAALLDAA RQGLEPGTEQ YYLTPRKVKG RLEILGITGY QGHIELMYRA
GAVASVVAEI VREHDEYRYQ RGIDDVPVHR YKPFARDAER GALIGVYAYA RMKDGAVSRV
VELSRDDIDR IKASSQGANS EYSPWQKHEA AMWLKSAVRQ LQKWVPTSAE FRREQLRAAA
EAHRVASAAD APDGATAPQG DVLDGEVLDE APTEPARSDD AGGHVEQEWP DAARPGGAQ
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