Gene SeD_A1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1382 
SymbolrecT 
ID6873317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1353608 
End bp1354438 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content53% 
IMG OID642784548 
Productrecombination and repair protein RecT 
Protein accessionYP_002215218 
Protein GI198244457 
COG category[L] Replication, recombination and repair 
COG ID[COG3723] Recombinational DNA repair protein (RecE pathway) 
TIGRFAM ID[TIGR00616] recombinase, phage RecT family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000000000000254024 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAAAC AGCCACCTAT TGCAAAAGCC GACCTGCAAA AAACACAGGG AGCACGCACC 
CCGACGGCAG TGAAAAATAA CAACGATGTG ATCAGCTTTA TCAACCAGCC TTCCATGAAA
GAACAACTGG CGGCGGCCCT GCCCCGCCAC ATGACAGCGG AACGCATGAT CCGGATAGCC
ACAACGGAAA TCCGAAAAGT TCCGGCGCTG GGTGACTGTG ACACCATGAG TTTTGTCAGC
GCCATCGTTC AGTGTTCCCA GCTTGGGCTG GAGCCCGGCG GCGCGCTCGG TCATGCCTAT
CTGCTGCCGT TCGGAAACAA AAACGAAAAG TCAGGCAAAA AAAACGTTCA GTTAATTATT
GGATACCGGG GAATGATCGA CCTTGCCCGC CGTTCCGGAC AGATTGCAAG TCTTTCCGCG
CGCGTCGTCC GCGAAGGTGA CGATTTCAGC TTCGAGTTTG GTCTGGAAGA AAAGCTGGTA
CACCGTCCGG GTGAGAACGA AGATGCACCA GTTACTCATG TCTATGCCGT TGCCCGCCTT
AAAGATGGTG GCACACAGTT TGAGGTAATG ACCCGTAAAC AGATAGAGCT GGTACGGGCA
CAGAGCAAAG CCGGTAACAA CGGCCTGTGG GTTACTCACT GGGAGGAAAT GGCAAAAAAA
ACCGCCATAC GCCGCCTGTT CAAATACCTG CCTGTATCCA TTGAGATCCA GCGCGCGGTA
TCAATGGACG AAAAGGAAAC GCTGACTATC GATCCGGCTG ATGCATCTGT CATCACAGGT
GAGTACAGCG TCGTCGAAAG CGCTGGCGTG GAAGAGAACG TGACCGCATA A
 
Protein sequence
MPKQPPIAKA DLQKTQGART PTAVKNNNDV ISFINQPSMK EQLAAALPRH MTAERMIRIA 
TTEIRKVPAL GDCDTMSFVS AIVQCSQLGL EPGGALGHAY LLPFGNKNEK SGKKNVQLII
GYRGMIDLAR RSGQIASLSA RVVREGDDFS FEFGLEEKLV HRPGENEDAP VTHVYAVARL
KDGGTQFEVM TRKQIELVRA QSKAGNNGLW VTHWEEMAKK TAIRRLFKYL PVSIEIQRAV
SMDEKETLTI DPADASVITG EYSVVESAGV EENVTA