14 homologs were found in PanDaTox collection
for query gene Bphy_1200 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A3875  hypothetical protein  70.17 
 
 
659 aa  869    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0820  hypothetical protein  54.9 
 
 
761 aa  641    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1200  hypothetical protein  100 
 
 
640 aa  1289    Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000043038  normal  0.447188 
 
 
-
 
NC_010625  Bphy_5604  hypothetical protein  53.99 
 
 
772 aa  643    Burkholderia phymatum STM815  Bacteria  normal  0.152191  normal 
 
 
-
 
NC_010676  Bphyt_4500  hypothetical protein  54.07 
 
 
748 aa  640    Burkholderia phytofirmans PsJN  Bacteria  normal  0.764548  normal 
 
 
-
 
NC_010681  Bphyt_0810  hypothetical protein  70 
 
 
658 aa  864    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2477  hypothetical protein  51.32 
 
 
763 aa  615  1e-175  Burkholderia phymatum STM815  Bacteria  normal  normal  0.76313 
 
 
-
 
NC_010681  Bphyt_0815  hypothetical protein  50.5 
 
 
760 aa  598  1e-170  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3870  hypothetical protein  49.28 
 
 
743 aa  594  1e-168  Burkholderia xenovorans LB400  Bacteria  normal  0.345923  normal 
 
 
-
 
NC_013526  Tter_2529  Carbohydrate-binding family 9  22.87 
 
 
1141 aa  72.4  0.00000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0914  hypothetical protein  27.51 
 
 
1086 aa  70.9  0.00000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.202389  normal 
 
 
-
 
NC_013526  Tter_2109  Carbohydrate-binding family 9  23.64 
 
 
1276 aa  58.2  0.0000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.0000203571  n/a   
 
 
-
 
NC_010338  Caul_3132  xylan 1,4-beta-xylosidase  26.53 
 
 
530 aa  45.1  0.004  Caulobacter sp. K31  Bacteria  normal  normal  0.297531 
 
 
-
 
NC_013526  Tter_2530  glycoside hydrolase family 39  27.44 
 
 
864 aa  44.3  0.007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
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