Gene Bphyt_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0810 
Symbol 
ID6283010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp893363 
End bp895339 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content65% 
IMG OID642620373 
Producthypothetical protein 
Protein accessionYP_001894456 
Protein GI187922814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCT CACGCATTGC TTACAGATTG ATGAAATCAC GACTATTCCT ACTCTCGACA 
CTCTCCCTCG CACTCGCCGG ATGCGGCGGT GGCGGCGGCA GTAACGGCGC CGCCAGCACC
GCGGCAGCTC AAGCCGGCGC CACCGGTTCA AGCAGTTCGG CCAGCACGTC TGCCGCCGGC
AACGCCAGCA CCGGCACTGC CGCTCTCAAC GCCGCGGGCG GTACCGCGGC CATGAGCTGC
GCCTCGCCCA CCACGTCGGG CGGCTCAGGC AGCGCGACGA TCTCCGCCGA TACGCCAAGC
GCCGACAACA CGCGCATCTT CGCGTCCGGC AGCACCTTCC AGCTCGTCTT CAACACCAAC
GCGCCGAGCG CGGACACGCT GAACTGGGCC GTCACGGACA CGCTCGGCCG CGTCGCCGCG
AGCGGCAGCA CCGCCGTGGC GAGCGGCGCG AAAACCATCA CGTTCAATTG CACCTCGACG
CTGGCCGGCT ATTTCGCGGC GACAGGCACG CTCGCGAAGA ACGGCGGCCA GTTGCCGCAA
GCCGGCACGC GTCCGGTCGG CATCGCCAGC TTCGGCGTAA CGCCGAACCT GTCCGGCGTC
GTTCCGGCCG TGACCTATGC GCGTCAGGAG CAGCATCGCT TCGGCATGCA AGGCGCGAAC
GACAACGGTC CGCTGCTCGC CGCGCTCGGC ATTTCGTCGA CGATCGACGA CCGCCAGCTC
TCCAGCATGG AACCGAACGG ACCGAACACG TTCAACCCGT CGGCGAATAA TCTCGATTCG
TTCTACAAGA GCGGCAACGT GATGCGTCTG ATCCGCCTCG ACGGCATTCC TGCGTGGGCG
AGCAGCACCG GCGCCTTCCA GGACGACACG ACGCTGCCGA CCGACATGTC GTATTACCAG
AGCTATATGA GCCGCGTCGG CACGGAATCG AACGCGATCC GCGCCGCGTA CTTCCCGACT
CAATCGGCGA ACTACTATCA GGTGACGTGG GAACCGAACC AGATGTGGAC CGACACCGAC
GCCAACTTCG TCGCGTTGTA TCAGGCGGTC TACCAGGGCA TTCATTCAAC CGATCCGCAC
GCGATGGTGA TGGGCCCGGC CGATGCCTTC CCGAGCCTGA CCACTTCGCA CCTGAAGCGC
CTCGCCTCGC TCGGCTTCGG CCAATTCATC GACGCGGTCG CCACGCACGG TTACTACGAC
GCGGGCACCT CGCCGTCGCA TCCGCCTGAG CGCTACGACA GCGACCCGTC CACCGCCGAC
GGTTCGTTGC GCGGCCAGAT GCGCAACCTG CGCGCGGAAA TGGCCACCGA CTACCGCACC
GGCATGCATC TGTTCTCGAC GGAAGCCGGC ATCAGCTACG ACCTTGGCAC GTCGTACGGC
CCGAACTATC CGAGCGCGAA CGTGTTGTAC GCACAAGCGG CGGTCGCGGC GCGCATGCAC
ATCATCACGC TCGGCGAAGG CGCGGACCAG ACCTACGTGT TCTACGGCGC GGACTATCCG
GATGAAGTCG GCTACGGCAC CTTCTTCGAC CTGAGCGATG CGCAAGGCGC GTACGGCGCG
ACCAACATCA GCCCGAAGCC GGTCGCCATG GCGATCAGCG CGATGACGCA CACGCTCGAC
GGCACCACCA CGCTCGGTCC GGTGAACGGC ACGCCGAACG GCGTCTACGC GTACGCGTTC
CAGCAGGTAG GCAACGGCGC GGTTGTCACC GCCTTGTGGG CGCACAACAA CAACGTGTGG
AGCGCCAGCG CGGGCTTTAG CTCGACCTAT AGCGTCGCGT ACAGCCTCAA CGTCGACGCG
CCGGGCACGA GCGGCACCGT GAAGGTGGTC GACATGATGG GCAACGCGAC CAATGCGAAG
TACAGCAACG GTGTGCTGAC GCTCAACCTG ACTGAATCGC CGGTGTATGT GGTGTCGAAC
AATGCGTCGG TCGCCAAGGC CAACGCGACG ACGCCGGTGG GATACGCCGG CATGTAA
 
Protein sequence
MISSRIAYRL MKSRLFLLST LSLALAGCGG GGGSNGAAST AAAQAGATGS SSSASTSAAG 
NASTGTAALN AAGGTAAMSC ASPTTSGGSG SATISADTPS ADNTRIFASG STFQLVFNTN
APSADTLNWA VTDTLGRVAA SGSTAVASGA KTITFNCTST LAGYFAATGT LAKNGGQLPQ
AGTRPVGIAS FGVTPNLSGV VPAVTYARQE QHRFGMQGAN DNGPLLAALG ISSTIDDRQL
SSMEPNGPNT FNPSANNLDS FYKSGNVMRL IRLDGIPAWA SSTGAFQDDT TLPTDMSYYQ
SYMSRVGTES NAIRAAYFPT QSANYYQVTW EPNQMWTDTD ANFVALYQAV YQGIHSTDPH
AMVMGPADAF PSLTTSHLKR LASLGFGQFI DAVATHGYYD AGTSPSHPPE RYDSDPSTAD
GSLRGQMRNL RAEMATDYRT GMHLFSTEAG ISYDLGTSYG PNYPSANVLY AQAAVAARMH
IITLGEGADQ TYVFYGADYP DEVGYGTFFD LSDAQGAYGA TNISPKPVAM AISAMTHTLD
GTTTLGPVNG TPNGVYAYAF QQVGNGAVVT ALWAHNNNVW SASAGFSSTY SVAYSLNVDA
PGTSGTVKVV DMMGNATNAK YSNGVLTLNL TESPVYVVSN NASVAKANAT TPVGYAGM