8 homologs were found in PanDaTox collection
for query gene Amir_1869 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1869  parallel beta-helix repeat protein  100 
 
 
384 aa  763    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1643  parallel beta-helix repeat-containing ricin B lectin  68.68 
 
 
563 aa  471  1e-132  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1461  Ricin B lectin  59.71 
 
 
560 aa  416  9.999999999999999e-116  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.851115  normal  0.229288 
 
 
-
 
BN001307  ANIA_08927  conserved hypothetical protein  43.75 
 
 
355 aa  258  2e-67  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.096319 
 
 
-
 
NC_013744  Htur_3897  Parallel beta-helix repeat protein  39.7 
 
 
414 aa  191  2e-47  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00247458  n/a   
 
 
-
 
NC_013158  Huta_2450  Ricin B lectin  39.03 
 
 
582 aa  189  7e-47  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0349225  n/a   
 
 
-
 
NC_013744  Htur_3900  hypothetical protein  36.42 
 
 
731 aa  149  9e-35  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.020807  n/a   
 
 
-
 
NC_013744  Htur_3906  Ricin B lectin  32.09 
 
 
744 aa  138  1e-31  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0306743  n/a   
 
 
-
 
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