| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1643 |
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| Symbol | |
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| ID | 3580479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1910168 |
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| End bp | 1911859 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685337 |
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| Product | parallel beta-helix repeat-containing ricin B lectin |
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| Protein accession | YP_289701 |
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| Protein GI | 72162044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCCC TCCCGTCCGG CGCAGTGCCG GACATGATCC CCACGGAGGT ACACGTGTCC
CTCACCCCCT CCCTAGTCCA CCGGAGAGAA TGGCCCTCAT CGGTGCGACT CGTGATGACC
TGCGGCGGCG TTGTTGCGCT CCTCGCCGCG CTGCTCACGG TTGTCGCCCG CCCGGCTATG
GCAGCGACGA TCGACACCGG CGCCTACTAT GTGCTGGTCA ACCGGCACAG CGGCAAAGCC
ATGGACGTGT GGGAATGGTC CACCGCCAAC GGCGGCGAGA TCCGCCAATA CGACAACCTG
GGCGGGTACA ACCAGCAGTT CCGGTTCGTC CCCGCCGGCG ACGGCTACTA TGCGCTGGTC
AACCGGCACA GCGGCAAAGC CGTCGACGTG TGGGAACGCT CCACCGCCGA TGGCGCAGAA
ATCCGCCAGT ACGACCACCA CGGCGGGTAC AACCAGCAGT TCCGGGTCGT CGACTCCGCG
GGCGGCGACA TCCGGCTGAT CAACCGCAAC AGCGGCAAAG CCCTGGAGGT CTGGGAATGG
TCCACCGCCA ACGGTGCCCG CATCTCCCAG TACACCGACC ACGACGGCGC CAACCAGCGC
TGGCAGCTCA TCAAAGTCAC CGACAACGGC GGCGGCTCCG ACACCTGCGG TAGCGGCTCC
TACCACGCCG AAGTCACGAA GAACGGCACC ACGTGGACCG CGCGCAAAGG CGGCAGCACC
CTCTACACCG GAAGCGACAT GCTCCAGGCG ATGCGGGCAG CGGTCAACAG CCTCACCCCC
GGACGCACTC ACAAGGAGCG GGTGGTGGTG CGCGGCTCCG GTTCGATGAG CGCGGGAAGC
TCGCTCGACC TGCCCAGCTA CACCGTGCTG GACGTGTGCG GCACGATCAA CGTGACCGGC
AGCCCGTCAG CCAACCACGC GGCAGTGCGG ATCCGCAACG CCCACGACGT TGAGGTCCCC
AACATCAGCG TCACCGGCAA CCCCTACTTC GGCATCTTTG TGCGCAACGC GTCCAACGTC
CACTTCGGCC AGGTGGACCT GCGGCTCTCC GGCGGCTTGG GCATGCGCAT CGACAACCAT
GACAACCGGA GTGTCCGCAC CCGCAACGTC AGCATCGACC ACGTCTACGT GTCGGGCACG
GGGAATCACG GCGTGGAAAC CTACGGCGTG GACGGCATCA CGATCGGCAC TGTCGTGGCA
CGCAACGTCG CCTACTCCGG ACTGCTGCTC AACGACACCA TCAACGCGAA CGTGGGCCTG
GTGGACGCGG AGAACGCGGG AACCGGCACC GGGTACGCGG CGTTCCGCAT GGCCAACCGC
AACGGACGGA TCGGCGACAG CTACCCCGTC AACATCCGCG TGGGTGAAGT GCGGGCCCGC
GGCGGCGGAC GCGGCGTCTT CTGCGTCTCC GAAAGCGGCG GTGCGGTCAT CGACCGGATC
GACTTGGCCA ACACCGGAAA CAACGCCATC CTCATCGAGA ACTGCTACAA CGTCACCGTG
GCCGGACAGT CCGGAACGGT GCGCGACTCC GGGGAGATCC GTATCGCTGC GCGGTCGGAG
TTCCCCAACA CCGCCAACGT CACCATCCAG AACCTCACGG TGACCAACAC CGGTATCCGG
GAGAACCCCT GCGGTATCAA CATCACCTTC CGCAACATCA CCCGGATCAA CAGCAGCTAC
AACGTCTGCT GA
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| Protein sequence | MRPLPSGAVP DMIPTEVHVS LTPSLVHRRE WPSSVRLVMT CGGVVALLAA LLTVVARPAM
AATIDTGAYY VLVNRHSGKA MDVWEWSTAN GGEIRQYDNL GGYNQQFRFV PAGDGYYALV
NRHSGKAVDV WERSTADGAE IRQYDHHGGY NQQFRVVDSA GGDIRLINRN SGKALEVWEW
STANGARISQ YTDHDGANQR WQLIKVTDNG GGSDTCGSGS YHAEVTKNGT TWTARKGGST
LYTGSDMLQA MRAAVNSLTP GRTHKERVVV RGSGSMSAGS SLDLPSYTVL DVCGTINVTG
SPSANHAAVR IRNAHDVEVP NISVTGNPYF GIFVRNASNV HFGQVDLRLS GGLGMRIDNH
DNRSVRTRNV SIDHVYVSGT GNHGVETYGV DGITIGTVVA RNVAYSGLLL NDTINANVGL
VDAENAGTGT GYAAFRMANR NGRIGDSYPV NIRVGEVRAR GGGRGVFCVS ESGGAVIDRI
DLANTGNNAI LIENCYNVTV AGQSGTVRDS GEIRIAARSE FPNTANVTIQ NLTVTNTGIR
ENPCGINITF RNITRINSSY NVC
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