Gene Amir_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1869 
Symbol 
ID8326054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2065200 
End bp2066354 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID644942418 
Productparallel beta-helix repeat protein 
Protein accessionYP_003099663 
Protein GI256376003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGGA AGAAGGTCAG CGGGGCAGCC GCCGCGATCG GCGTCGCGGT GCTCGGCGCG 
GCCCTGGTCC ACGCGGTGGT CGACCCGGCC CCCGCGTCGG CCGCGGACTG CGGCAGCGGC
ACGTACCACG CCGAGGTGAC CAAGTCCGGG AGCACCTGGA CCGCCAAGCG GGGCAGCACG
ACCGTGCACA CCGGCACCGA CATGCGCGCC GCCATGCAGG CCGCCGCGGG CGCGCTGACG
TCCGGGCGCA CCAGCAAGGA GCGCCTGGTG GTGCGCGGTT CCGGCACGAT GAGCGCCGGG
TCGCGGTTCT CGCTGCCCAG CTACACCGCG CTCGACGTGT GCGGCACCAT CAACGTCACC
GGCAGCGGCA GCGGCGACCA GGCCCCGGTG TACGCGCGCG GCGTCACCGA CGTCGAGATC
CAGCACCTCA ACGTCACCGG GACGCCGCTG TACGGCATCT TCATCCGCAA CGCCACCAAC
GTCGTGCTCG GCCAGATCGA CATGCGGCTG TCCAGCGGGC TCGGCGTGCG GATCGACAAC
CGGGGCGACA CCTCGGTGCG CACCAGGAAC GTGCGCATCG ACAACGTGTA CGTGTCCGGC
GCGTCCAGCC ACGCCGTGGA GACCTACGGG CTGGACGGGC TGACCGTCGG CACGGTGACC
GCGCGCAACG TCGGCGAGTC CGGGCTGCTG CTCAACGACA CCATCAACGC GAACGTCACC
CTGGTCGACG CGGACGGCGC CGGGACCGGC ACCGGGTACG CGGCGTTCCG CACCGCCAAC
CGGAACGGGC GGATCAACAA CGCCTACCCG ATCAACGTCC GGGTCGGGCA GGTCATCGCG
CGCGGCGGCG GGCGCGGGGT GTTCTGCGTG TCCGAGAGCG GCGGGCTGCA GATCGACCGG
GTGGACATCG CGAACACCGG CAGCAACGCG ATCCTGATCG AGAACTGCTA CAACGTGAAC
CTGGCCGCGC AGAGCGGGAC CGTGACCGGG CCCGGCGACA TCAGGCTGGC CTCGCGGTCG
GAGTTCCCGG TGACCAAGGA CGTCGTGGTG CAGAACCTGC GGGTGACCAA CTCGGCGATC
ACCGAGAACC CGTGCGGCAC GAACACCACG TTCCGCAACA ACACGCTCGT CAACAGCAAG
CAGACGATCT GCTGA
 
Protein sequence
MVRKKVSGAA AAIGVAVLGA ALVHAVVDPA PASAADCGSG TYHAEVTKSG STWTAKRGST 
TVHTGTDMRA AMQAAAGALT SGRTSKERLV VRGSGTMSAG SRFSLPSYTA LDVCGTINVT
GSGSGDQAPV YARGVTDVEI QHLNVTGTPL YGIFIRNATN VVLGQIDMRL SSGLGVRIDN
RGDTSVRTRN VRIDNVYVSG ASSHAVETYG LDGLTVGTVT ARNVGESGLL LNDTINANVT
LVDADGAGTG TGYAAFRTAN RNGRINNAYP INVRVGQVIA RGGGRGVFCV SESGGLQIDR
VDIANTGSNA ILIENCYNVN LAAQSGTVTG PGDIRLASRS EFPVTKDVVV QNLRVTNSAI
TENPCGTNTT FRNNTLVNSK QTIC