10 homologs were found in PanDaTox collection
for query gene Amir_1821 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1821  hypothetical protein  100 
 
 
428 aa  826    Actinosynnema mirum DSM 43827  Bacteria  normal  0.400751  n/a   
 
 
-
 
NC_013595  Sros_6266  hypothetical protein  36.76 
 
 
523 aa  81.6  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.120187 
 
 
-
 
NC_013510  Tcur_0317  hypothetical protein  31.85 
 
 
539 aa  78.6  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0269  hypothetical protein  27.29 
 
 
490 aa  78.2  0.0000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2107  hypothetical protein  24.48 
 
 
603 aa  67  0.0000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.586574 
 
 
-
 
NC_013159  Svir_38810  hypothetical protein  30.32 
 
 
776 aa  58.2  0.0000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.707868  normal  0.67382 
 
 
-
 
NC_013131  Caci_0876  hypothetical protein  39.08 
 
 
704 aa  56.2  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.187127  normal  0.454396 
 
 
-
 
NC_013093  Amir_7051  hypothetical protein  27.55 
 
 
814 aa  53.9  0.000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2323  hypothetical protein  24.17 
 
 
310 aa  49.7  0.0001  Ruegeria sp. TM1040  Bacteria  normal  0.59768  normal 
 
 
-
 
NC_013093  Amir_6989  hypothetical protein  30.39 
 
 
712 aa  46.2  0.001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.240907  n/a   
 
 
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