Gene Amir_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1821 
Symbol 
ID8326006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2001648 
End bp2002934 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content78% 
IMG OID644942370 
Producthypothetical protein 
Protein accessionYP_003099615 
Protein GI256375955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.400751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGACGC CCGTGGACCA GCACCCGACG CCCGCCGAGC CCGAGCTGAC GCCCGTGGAG 
CGACAACTGG TCGACCACGT CGCGCGCGGC GAGGTGCTGG ACCTGACCGG CCCCCGGCCG
GTCGAGGGCT GGGAGCGGCG GTCCTGGGAG GGGCGCGCGG TCTCCGCGCG GGTCATCCGC
GACCTCGTCC TCGGCAGGCT CGCGCCCACC CCCGACCCGC ACGGCCTGCG GCTGCACGGC
GCGCGCGTCA CCGGCAGGCT CGACCTGGAG AACGTCACCA GCGCCGTCCC GGTCGAGCTG
CTCGGCTGCC TGCTCGACGA GGGCGTCAAC GCCCGCGACG CCGACCTGCC CGCGCTCGTG
CTGCGCGAGT GCCGCGTCGG CCACCCGAGC GAGCCGCCGG TGGACGCCGA GGGCCTGGCC
ACCAGGGCGT TCGCGCTGGA GCTGAGCGAG GTCCGGGCGC GCTCACCGCG CGGCGCCGTC
GTCCTCGCCC ACGCCCGCCT CGGCCGGGCC TCCCTGGTCG GCGCGTCGCT GGTCAACGCC
GAGGGCCCCG CGCTCGCCGC CCGGTCCCTG CGCGTGGACC AGGGCTGCTA CCTGCTCGCG
CTCGAGGCGG TCGGCGGCGA GCTGGACGTC GCGGTCGACC TGCGCAACGC CCGCGTCGGC
GAGCAGTTCT GCTTCCAGCC CACCCGCCTC GAGCACTCCG GTGGTCCGCA GCGCCGCGTC
GACGTCGACG GGCTCACCCA CGCGGGCCTG CCCACCGGGA TCGACCCCGC CGAGTGGCTC
GCCCTGCTGC GCGAGGCCAC CCCCGGCTAC ACCGCCCAGC CCTACCGGCA CCTCGCCGCC
GCCCACCGCG CCGCCGGGCA CGACGCGCAG GCCCGCCGGG TGCTCGTCGC CCAGCGCCGC
GACCAGCTCG CCAGGGGCGC CCTCGGCGCG GGCGAGCGGG CCTGGGCGCG GCTCACCGGG
CTGCTGCTCG GCTACGGCTA CCAGCCGTGG CGCGCGCTGC TGTGCCTGCT CGCGGTGCTG
GTGGTCGCCG TCGCGCTCGC CCTGGCCTTG GGTGACGACG GCCTGGCCAG GACCGGGACG
CCGCCGGGCC CCTGCCCGGT CGTGGAGCGG GTCGCGTTCG GCCTCGACGT CGGCTCCCCG
CTGCTCACCA CCACACCGCG CTGCGAGCCC ACCGGCGCCA CCTCGGGGCA GGCGCTGGGC
GTCGCCGGTT GGCTGCTGCG GCTGCTCGCG TGGGGCTTCG CGACGCTGTT CGTCGCCGGG
TTCACCGGGG CGGTGCGCAA GACCTGA
 
Protein sequence
MPTPVDQHPT PAEPELTPVE RQLVDHVARG EVLDLTGPRP VEGWERRSWE GRAVSARVIR 
DLVLGRLAPT PDPHGLRLHG ARVTGRLDLE NVTSAVPVEL LGCLLDEGVN ARDADLPALV
LRECRVGHPS EPPVDAEGLA TRAFALELSE VRARSPRGAV VLAHARLGRA SLVGASLVNA
EGPALAARSL RVDQGCYLLA LEAVGGELDV AVDLRNARVG EQFCFQPTRL EHSGGPQRRV
DVDGLTHAGL PTGIDPAEWL ALLREATPGY TAQPYRHLAA AHRAAGHDAQ ARRVLVAQRR
DQLARGALGA GERAWARLTG LLLGYGYQPW RALLCLLAVL VVAVALALAL GDDGLARTGT
PPGPCPVVER VAFGLDVGSP LLTTTPRCEP TGATSGQALG VAGWLLRLLA WGFATLFVAG
FTGAVRKT