Gene Snas_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2107 
Symbol 
ID8883300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2232627 
End bp2234438 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510894 
Protein GI291299616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.586574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGA TCGAGCTGAC CGAAACCGAA CGCCGTATCG CGATGGCGAT GAACACCGGA 
CGGCTGGTGG ATCTGCGCGA GACCGACGAT CCGGTGCGGG CGGCGGTGCT TCAGAAGCTG
CTGGACGAGG CGGGCGACGT GGCGGTGGCG CTGCGGGTGC GGGGCGCCCG CATTGTCGGG
CACCTCAACC TGGGCGGGCG CCACATCCGC ATCCCCGTCG ACCTGCGCGA ATGCCACTTC
ACCGGCAAGA TCCTGCTGGC CAAGTCGCGG CTGCCGGAGC TGTCGCTGCG CGGCTCGCAC
TGCCCGCTCG GCCTGTCGGG CCGGGGCCTG CACATCGACG GCGCGCTCAA CCTCGCCGAC
ACGAGGATGG ACGACACGCT CTACCTCAAG CGGCTGTGCG CCGAGATCGT GTTCCTGGAC
GGGGCGCACC TGCGCAGCAC CAACTTCGCG TTGCAGTTGC GCGGCGCCGA GGTCAAGCAG
GAGCTGTACT GCGGCCGCCG CTTCACCGCG CACGGCAAGG TCTTCATGTA CGGCATCAAG
ATCGGCGGCC AGCTGGACAT GAACGACGCC GTTCTGCACA ACAGCGGCGA GAACTGCCTG
GTGCTGAACA ATTCCGAGGT CCGTCAGGAC GTGCAGCTGC GCAACGCCCG CATCGCCGGG
ACGACCCGGT TCACCAAGGC GAAGATCGGC GGGAACCTGG AGCTGACCTC GATGGCGGCC
TCGGCTCCCG GCGACAGCGC GGTGGTCGCC GACATGATCG AGGTCGAGCA GAACGTCCTG
CTCAACAAGG GTTTCTCCGC GATCGGGGAG GTGGACTTCT TCCTGGCCCG CGTCGGCGGC
CGTCTCGAAG TGGACGGCGC CTGGCTGAGC AATCCCGGCG GCGACGCGTT CTCGGCCTCG
CGGGCCACCA TCGGACAGTC GTTGCTGCTC AACGACCTCG CCACCCAGGG CGCCATCCGC
CTCTACGGGT CCAAGATCAC CGGACAGCTG TCGGTCAACG GGTCCACCAT CATCAGTCCC
GACCGGATCG CCCTGGACAT GGGGCAGTGC GAGATCGTCC AGTCACTGTG GATCTGTCGG
GGTTCCCGCA TCGAGGGCAC CGTCGACCTG ACCAACGCTC GCATCGGCAA CCGGTTCTCG
CTGCGGGAGT CCACGGTGGC CTGTGTCATC GCCACCGACC TGTCCATGGA CATCCTCGAC
GACGACCCCG AGTGCTGGCC CGCCGGTTCC CACATCGGCG GCATGACCTA CCGCAACCTG
CCCGAGGACG GCCGCGGCTA CGTGCACAAC CGGACGGACT GGCTGAAACG CATGGTGCCG
CAGTACACCC CGCAGCCGTA CACCCAGCTG ATCTCGGTGT ACCGGTCGCT GGGCAACAAC
GCCGCCGCCC GCGTCGTCGT CATCGAGCAG GAGGCCACCC ACCGCCGTTC ACATTGGAAC
TGGGCCTACC GCACCGTGTC GAGGGCCTGG GGCGGGATTC TACGATGGAC GATCGGCTAC
GGTTACGCCC CTTGGCGAGT GGTGCCGTGG ATGACCGGAC TGTTCCTGGC GGCCTGGGCC
GTGTTCTCCG TCAAGGGCGC CTTCTCCTCG GCGGAGGTCT TCTCGCAGTC CCGCAAGGGC
GGCAACCACG AGGAGTTCCA CGCGGCGCTG CACGCCCTGG ACACCGTGCT GCCGGTGATC
GCGCTGGAGA ACGACAAACA GTGGATCGCC AACGGCGCCT TCGCCTGGTG GGAGGCGGGT
TTCGCCAGTT TCGGCTGGTT CCTGAGCCTG TTGGCCGCCG CCGGGGTCGC CGGGGTCTTC
AAGCGACAGT GA
 
Protein sequence
MPEIELTETE RRIAMAMNTG RLVDLRETDD PVRAAVLQKL LDEAGDVAVA LRVRGARIVG 
HLNLGGRHIR IPVDLRECHF TGKILLAKSR LPELSLRGSH CPLGLSGRGL HIDGALNLAD
TRMDDTLYLK RLCAEIVFLD GAHLRSTNFA LQLRGAEVKQ ELYCGRRFTA HGKVFMYGIK
IGGQLDMNDA VLHNSGENCL VLNNSEVRQD VQLRNARIAG TTRFTKAKIG GNLELTSMAA
SAPGDSAVVA DMIEVEQNVL LNKGFSAIGE VDFFLARVGG RLEVDGAWLS NPGGDAFSAS
RATIGQSLLL NDLATQGAIR LYGSKITGQL SVNGSTIISP DRIALDMGQC EIVQSLWICR
GSRIEGTVDL TNARIGNRFS LRESTVACVI ATDLSMDILD DDPECWPAGS HIGGMTYRNL
PEDGRGYVHN RTDWLKRMVP QYTPQPYTQL ISVYRSLGNN AAARVVVIEQ EATHRRSHWN
WAYRTVSRAW GGILRWTIGY GYAPWRVVPW MTGLFLAAWA VFSVKGAFSS AEVFSQSRKG
GNHEEFHAAL HALDTVLPVI ALENDKQWIA NGAFAWWEAG FASFGWFLSL LAAAGVAGVF
KRQ