Gene TM1040_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2323 
Symbol 
ID4078313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2443610 
End bp2444542 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID638007645 
Producthypothetical protein 
Protein accessionYP_614317 
Protein GI99082163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.59768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGTA AGGGTACGAC TTTCAACACA CCAAAAGGAA TGGCCCTCAC CCTACGAGAT 
GCCGAAATCA CCGGCGGTCT TTACCTCAGC AACATCACTC AAATCCGGGG CATTCTTGAT
TTGAGCGATG CCAAAACCTC TATTCTCGTC GACAATCCCC ACAGCTATCC GCCGACTGGC
GCGCTGATCT TGGATGGCTT CACCTATGAC CGGATCATTG GATCAACCGA CTCGAAGACG
CGGCTCGAAT GGCTCGCCAA AGGTGACCGC TGGAACGGAG AGTTCTTCCC CCAGCCTTAC
AAACAGCTCG CCAAGACCCT GCATGACATG GGGCACGAGG CTGACGCGAG GCAGGTCCGC
ATCACGCTCG CATGCAAGCT ACGCCAAGAA GCTCGCGCCA AACTGCGTAT CACCCCGAAT
GGTGACCTGA GTACCGGCCT GCATAGCATC TGGCGCGATA TTCTGCGCCT CTGCCTTGGC
GGAAAGGACA GCATCTCTCT GCTGCTCACC GCCCATGGCT ACAAACCGCA GCGCAGCCTC
TATGCGCTCA TTCTGCTGTT CGCGGCCGCA ACCTTTCCCG CGCAATGGGC CTGGGACGAA
GGCAGCTTTG CCCCCAATTC AGGCCCCATT CTGCTCTCCG AAGGCTGGCA AGAGCTGGCG
CGGGATGACG ACATCCAAAA CCCCGCCGCC GAATGGGCGA ACCGCAACGC CATCCCCGGC
AAGGACTGGG AGACATTCAA CCGATACGCC TATGCCGCTG ATGTCGTGAT CCCCATCGTC
GAATTTGGCC AGACCGAGGC CTGGGCCCCT TCCACCGAAC GCGGACCTTG GGGGTATCAC
CTCTGGTGGC TGCGCTGGGG TTTCACCACC CTGGGCTGGA TCGTCACCGC GCTGGGGGCT
GCTGCCCTCA CCGGCCTTAT CCGGCGTGAC TGA
 
Protein sequence
MSCKGTTFNT PKGMALTLRD AEITGGLYLS NITQIRGILD LSDAKTSILV DNPHSYPPTG 
ALILDGFTYD RIIGSTDSKT RLEWLAKGDR WNGEFFPQPY KQLAKTLHDM GHEADARQVR
ITLACKLRQE ARAKLRITPN GDLSTGLHSI WRDILRLCLG GKDSISLLLT AHGYKPQRSL
YALILLFAAA TFPAQWAWDE GSFAPNSGPI LLSEGWQELA RDDDIQNPAA EWANRNAIPG
KDWETFNRYA YAADVVIPIV EFGQTEAWAP STERGPWGYH LWWLRWGFTT LGWIVTALGA
AALTGLIRRD